Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq654 104 4e-20 >seq654 Length=4387 Score = 104 bits (114), Expect = 4e-20 Identities = 191/274 (70%), Gaps = 6/274 (2%) Strand=Plus/Plus Query 6 AGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTAT 65 || ||||| ||||| |||| |||||| ||||| | || | | ||| |||||| | Sbjct 4097 AGAGCTTCTTGCTTATATGCTTTCAGCAATTATCTCGGATAAGCGTGGCTACCCAGCG-T 4155 Query 66 GCACTTGGCAGT--ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123 || ||| ||| ||||||| ||| | || || ||| |||||||||||||||| Sbjct 4156 GCCATTGACAGATGACAACTGAAACACTATTGGCTTACATATCTCGGTCCTCTCGTACTA 4215 Query 124 AGGACA-GCTCCTCTCAAATTTC-CTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 |||| |||| |||| ||| | | ||| | |||| ||||| |||||| | Sbjct 4216 GAGACATTCTCC-CTCATTCTTCAAGTCCCTCACAGCAGATAAAAACCGACCTGTCTTAC 4274 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||| |||||||||| ||| || || ||||||| || ||||| || ||||||||| Sbjct 4275 GACGGTCTGAACCCAACTCACGAACCACTTTAATCGGTGAACACCCGAACCCTTGGATAT 4334 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | |||| |||||||| | || |||||||| Sbjct 4335 TGCTTCGTATCCAGGATGTGGTAAGTCGACATCG 4368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780790824868