Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq654 104 4e-20
>seq654
Length=4387
Score = 104 bits (114), Expect = 4e-20
Identities = 191/274 (70%), Gaps = 6/274 (2%)
Strand=Plus/Plus
Query 6 AGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTAT 65
|| ||||| ||||| |||| |||||| ||||| | || | | ||| |||||| |
Sbjct 4097 AGAGCTTCTTGCTTATATGCTTTCAGCAATTATCTCGGATAAGCGTGGCTACCCAGCG-T 4155
Query 66 GCACTTGGCAGT--ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123
|| ||| ||| ||||||| ||| | || || ||| ||||||||||||||||
Sbjct 4156 GCCATTGACAGATGACAACTGAAACACTATTGGCTTACATATCTCGGTCCTCTCGTACTA 4215
Query 124 AGGACA-GCTCCTCTCAAATTTC-CTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181
|||| |||| |||| ||| | | ||| | |||| ||||| |||||| |
Sbjct 4216 GAGACATTCTCC-CTCATTCTTCAAGTCCCTCACAGCAGATAAAAACCGACCTGTCTTAC 4274
Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241
|||| |||||||||| ||| || || ||||||| || ||||| || |||||||||
Sbjct 4275 GACGGTCTGAACCCAACTCACGAACCACTTTAATCGGTGAACACCCGAACCCTTGGATAT 4334
Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
| |||| |||||||| | || ||||||||
Sbjct 4335 TGCTTCGTATCCAGGATGTGGTAAGTCGACATCG 4368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780790824868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |