Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq603 183 9e-44 >seq603 Length=12139 Score = 183 bits (202), Expect = 9e-44 Identities = 229/313 (73%), Gaps = 1/313 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| |||||||| |||||| |||| |||||| ||| |||| ||||||| || || Sbjct 3435 GATTAGATAGTTGGTGAGGTAAAGGCTCACCAAGTCGAAGATCGGTAGCCGGTTTGGAAG 3494 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | |||||| | || |||||||||||||| || |||||||||||||||||||| | | Sbjct 3495 AACGGTCGGCCGCGATGAAACTGAGACACGGTTCATACTCCTACGGGAGGCAGCAGGGAG 3554 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||| ||| |||||| ||| |||| ||| | | |||||| ||||||||||| Sbjct 3555 GAATTTTGGACAATGAAGGAAACTTTGATCCAGTGATACTGCGTGAATGATGAAGGCCTA 3614 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||||||||| ||| | | |||||||||||| || | || || | | Sbjct 3615 TGGGTCGTAAAATTCTTTTAATAGCTAAGATAATGACGTTAACTATTGAATAAATTCTGT 3674 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||| | |||||||||| ||||||||||| | || ||| || ||||| ||| | Sbjct 3675 CTAATTCTGTGCCAGCAGACGCGGTAATACAGAAAGGATGAGCATTGTCCGGTTTTA-TT 3733 Query 467 GGGCGTAAAGGGT 479 |||||||||| || Sbjct 3734 GGGCGTAAAGAGT 3746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497581834112