Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq603 183 9e-44
>seq603
Length=12139
Score = 183 bits (202), Expect = 9e-44
Identities = 229/313 (73%), Gaps = 1/313 (0%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
|||||| |||||||| |||||| |||| |||||| ||| |||| ||||||| || ||
Sbjct 3435 GATTAGATAGTTGGTGAGGTAAAGGCTCACCAAGTCGAAGATCGGTAGCCGGTTTGGAAG 3494
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| |||||| | || |||||||||||||| || |||||||||||||||||||| | |
Sbjct 3495 AACGGTCGGCCGCGATGAAACTGAGACACGGTTCATACTCCTACGGGAGGCAGCAGGGAG 3554
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
|||| ||| |||||| ||| |||| ||| | | |||||| |||||||||||
Sbjct 3555 GAATTTTGGACAATGAAGGAAACTTTGATCCAGTGATACTGCGTGAATGATGAAGGCCTA 3614
Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406
|||||||||| ||| | | |||||||||||| || | || || | |
Sbjct 3615 TGGGTCGTAAAATTCTTTTAATAGCTAAGATAATGACGTTAACTATTGAATAAATTCTGT 3674
Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466
|||| | |||||||||| ||||||||||| | || ||| || ||||| ||| |
Sbjct 3675 CTAATTCTGTGCCAGCAGACGCGGTAATACAGAAAGGATGAGCATTGTCCGGTTTTA-TT 3733
Query 467 GGGCGTAAAGGGT 479
|||||||||| ||
Sbjct 3734 GGGCGTAAAGAGT 3746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497581834112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |