Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq603 78.8 2e-12 >seq603 Length=12139 Score = 78.8 bits (86), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 |||||| || | ||| ||| |||| ||| || || |||||| ||| ||||| ||| Sbjct 3843 GAATTCTTAATCTAGTGGTAAAATATGTAAAT--TAAGAGGAATACCGAATGCGAAAGCG 3900 Query 249 GCTTGCTGGACTGTAACTGACACTG-AGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 | || | | || |||| ||| | | ||||| | | || ||||||| |||||||| Sbjct 3901 CTCTTCTAGGTT-TATTTGACGCTGTACGAACGAAACCCTAGGTAGCAAACGGGATTAGA 3959 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAA 338 ||||| ||||||| | | ||||||||||||| Sbjct 3960 TACCCCGGTAGTCTAGGGCGTAAACGATGAA 3990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203185405184