Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq603 78.8 2e-12
>seq603
Length=12139
Score = 78.8 bits (86), Expect = 2e-12
Identities = 110/151 (73%), Gaps = 4/151 (3%)
Strand=Plus/Plus
Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248
|||||| || | ||| ||| |||| ||| || || |||||| ||| ||||| |||
Sbjct 3843 GAATTCTTAATCTAGTGGTAAAATATGTAAAT--TAAGAGGAATACCGAATGCGAAAGCG 3900
Query 249 GCTTGCTGGACTGTAACTGACACTG-AGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307
| || | | || |||| ||| | | ||||| | | || ||||||| ||||||||
Sbjct 3901 CTCTTCTAGGTT-TATTTGACGCTGTACGAACGAAACCCTAGGTAGCAAACGGGATTAGA 3959
Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAA 338
||||| ||||||| | | |||||||||||||
Sbjct 3960 TACCCCGGTAGTCTAGGGCGTAAACGATGAA 3990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203185405184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |