Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq495 423 4e-116
seq1096 78.8 2e-12
>seq495
Length=8336
Score = 423 bits (468), Expect = 4e-116
Identities = 280/309 (91%), Gaps = 1/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 6097 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 6038
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6037 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 5978
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| |||||||||| ||||| |||||| | ||||| | |
Sbjct 5977 GATGTTCTGGGCCGCACGCGCGTTACACTGACACAGCCAGCGAGTTTCT-TCCTTGACAG 5919
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5918 AGATGTCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 5859
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 5858 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 5799
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 5798 CCCTTTGTA 5790
>seq1096
Length=509
Score = 78.8 bits (86), Expect = 2e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
||||||||||||||||||||||||| |||||||| |||| |||| || |||||| |||
Sbjct 143 GGCAATAACAGGTCTGTGATGCCCTCAGATGTTCCGGGCTGCACACGTGCTACAATGA 200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947188510464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |