Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq495 767 0.0 seq1044 215 2e-53 >seq495 Length=8336 Score = 767 bits (850), Expect = 0.0 Identities = 494/537 (92%), Gaps = 7/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2415 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 2474 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 2475 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 2534 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||||| |||||| ||| | | ||| |||| |||||| ||| Sbjct 2535 GGCCCGCGAAGGACCTTAACACCAGAAGTTGGACAG--AAGTCCAGCCCCGCTTA--TGA 2590 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct 2591 ATAAGTAAAAAAACAATAAGAGTAGTGGTATTTCACTGTTGCCGAA---GCTCCCACCTA 2647 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 |||||||||||| | ||| |||||| | ||| ||||||||||||||||||||||||||| Sbjct 2648 TTCTACACCTCTTATGTCTTTTCACCATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 2707 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2708 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATA 2767 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2768 GGGACAGTGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 2827 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 2828 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTCCA 2887 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 2888 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGCCAACACCACTTTCTG 2944 >seq1044 Length=681 Score = 215 bits (238), Expect = 2e-53 Identities = 183/224 (82%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTC 383 ||||| ||||| ||||||||| |||||||||| ||| |||||||||| | |||||| Sbjct 178 CCAAGACCGTTGGCTTGGCTGTAATTTCGCTAGAGAGTGAGTAGGGACAGTAGAAATCTC 237 Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443 ||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct 238 GTTGATCCATTCATGCGCGTCACCAATTAAATGACGAGGCATTTGGTTACCTTAAGAGAG 297 Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTT-----GGTTGAATTTC-TTCACTTTGACA 497 ||||||||||||||||||||||||||||||| | || || || ||| | || Sbjct 298 TCATAGTTACTCCCGCCGTTTACCCGCGCTTAAAAATGCTGTATGTCACTCAGAATAACT 357 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 | ||||||||||||||||| |||| | || ||||| |||| Sbjct 358 TGCAGAGCACTGGGCAGAATACACAATATGTTCACATCTATTTC 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635180165024