Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq532 145 3e-32 >seq532 Length=9364 Score = 145 bits (160), Expect = 3e-32 Identities = 328/483 (68%), Gaps = 9/483 (2%) Strand=Plus/Minus Query 3 GACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAA 62 || ||||| |||| |||| |||| ||| ||| ||||||||| | ||||| | Sbjct 9215 GAGTTGTATCTCTCACAGTTAAGCAGGCTTATGCCATTACACTCATCGGTTGATTTCTGT 9156 Query 63 CCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTT 122 ||| ||||| ||||||| |||| ||||||| ||| ||||| | | |||| Sbjct 9155 CCAACCTGAGCCTACCTTTGTACGCCCCCGTTACTCTTTAGGAGG-CTGTCATCCCAACA 9097 Query 123 AAACTACCCACCAGGCACTGTCCCCAACCCAGAT-CATGGGCCAAGGTTAGATATCCACT 181 ||||| |||| || ||| | ||| | || | ||| | ||| || ||| | | | Sbjct 9096 AAACTGCCCAGCATGCATTTTCCTTTGACGAGTTTCATCGTTCAAAGTAAGAAGTAAAGT 9037 Query 182 ACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTC 241 | || ||||||| || |||| | | || | | ||| | | | ||| || Sbjct 9036 CTATTAAGGATGGTATTCCACTGACGAAT--AAAAGAAACA-CGTAGTTCC-TAATACTC 8981 Query 242 TCCCACCTATCCTACACA-AACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||| |||| ||| ||| ||| | | ||| | ||||| || ||| ||| ||||| | Sbjct 8980 TCCCATCTATTCTATACATAACAGAATTCAATTC-AATACAAACCTACAGTAAAGGTTCA 8922 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| || ||| || | | | | || || | | ||| | |||| | | Sbjct 8921 TAGGGTCTTTTCCTCTTGCTGCAAGTATCCGGTATATTCTCCGGAACTCTATTTTCGCTG 8862 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 || | |||||||||| | ||||||||||||||| |||||||| || ||| Sbjct 8861 AGCAGATAGTTGAGACAGTGTGAACGTCGTTACGCCATTCATGCAGGTCAAAAATTAATT 8802 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||| | || |||| |||||| || ||||||||||| ||||| Sbjct 8801 GACAAGGAATTTCGCTACCTTTGAATCGTTACAGTTACGACTGCCGTTTACTGAGGCTTA 8742 Query 480 AAT 482 ||| Sbjct 8741 AAT 8739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702379349888