Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23] 1,213 sequences; 29,181,415 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq603 132 1e-28 >seq603 Length=12139 Score = 132 bits (146), Expect = 1e-28 Identities = 150/200 (75%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 |||||||| ||||| | || ||| |||||||| ||||||| | |||| ||| | | Sbjct 3634 TAAAAGAATTTTACGACCCATAGG-CCTTCATCATTCACGCAGTATCACTGGATCAAAGT 3576 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 || | ||||| |||| ||||||| |||||||||||||||||||| || ||||||||||| Sbjct 3575 TTCCTTCATTGTCCAAAATTCCTCCCTGCTGCCTCCCGTAGGAGTATGAACCGTGTCTCA 3516 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 ||| || | || |||| | || || | | ||| | ||| | | || |||| ||| | Sbjct 3515 GTTTCATCGCGGCCGACCGTTCTTCCAAACCGGCTACCGATCTTCGACTTGGTGAGCCTT 3456 Query 260 TACCCCGCCTACTACCTAAT 279 |||| | || |||| ||||| Sbjct 3455 TACCTCACCAACTATCTAAT 3436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068787035456