Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20platani_20[genbank_20GCA_5F000978885.1_202015-04-23]
1,213 sequences; 29,181,415 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq603 132 1e-28
>seq603
Length=12139
Score = 132 bits (146), Expect = 1e-28
Identities = 150/200 (75%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139
|||||||| ||||| | || ||| |||||||| ||||||| | |||| ||| | |
Sbjct 3634 TAAAAGAATTTTACGACCCATAGG-CCTTCATCATTCACGCAGTATCACTGGATCAAAGT 3576
Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199
|| | ||||| |||| ||||||| |||||||||||||||||||| || |||||||||||
Sbjct 3575 TTCCTTCATTGTCCAAAATTCCTCCCTGCTGCCTCCCGTAGGAGTATGAACCGTGTCTCA 3516
Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259
||| || | || |||| | || || | | ||| | ||| | | || |||| ||| |
Sbjct 3515 GTTTCATCGCGGCCGACCGTTCTTCCAAACCGGCTACCGATCTTCGACTTGGTGAGCCTT 3456
Query 260 TACCCCGCCTACTACCTAAT 279
|||| | || |||| |||||
Sbjct 3455 TACCTCACCAACTATCTAAT 3436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068787035456
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