Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1692 179 2e-43 seq1545 179 2e-43 seq1539 179 2e-43 seq1028 179 2e-43 seq1480 149 3e-34 seq257 129 3e-28 seq1462 84.2 1e-14 >seq1692 Length=715 Score = 179 bits (198), Expect = 2e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| || Sbjct 41 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATCCACC 100 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 101 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 157 >seq1545 Length=2210 Score = 179 bits (198), Expect = 2e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| || Sbjct 845 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATCCACC 904 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 905 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 961 >seq1539 Length=8485 Score = 179 bits (198), Expect = 2e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| || Sbjct 2746 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATCCACC 2687 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2686 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2630 >seq1028 Length=939 Score = 179 bits (198), Expect = 2e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| || Sbjct 92 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATCCACC 151 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 152 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 208 >seq1480 Length=501 Score = 149 bits (164), Expect = 3e-34 Identities = 107/118 (91%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| || Sbjct 295 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATCCACC 354 Query 61 GATCCCTAGTC-GGCATAG-TTTACGG-TTAAGACTACGAC-GGTATCTGATCGTCTT 114 ||||||||||| ||||||| |||| || ||||||||||||| |||||||||||||||| Sbjct 355 GATCCCTAGTCGGGCATAGTTTTAKGGTTTAAGACTACGACGGGTATCTGATCGTCTT 412 >seq257 Length=1205 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| | Sbjct 1110 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 1052 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1051 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 994 >seq1462 Length=796 Score = 84.2 bits (92), Expect = 1e-14 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC 56 ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 464 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGATGGAGTCAAAAAGATAACATC 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278394923550