Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1539 361 9e-98 seq1545 358 1e-96 seq1566 345 7e-93 seq329 297 3e-78 seq1480 288 2e-75 seq1476 172 9e-41 seq1485 156 7e-36 >seq1539 Length=8485 Score = 361 bits (400), Expect = 9e-98 Identities = 235/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3129 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3070 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 3069 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3011 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| ||| || | ||||||||||||||||||||||||||||||||||| |||||| Sbjct 3010 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 2951 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 2950 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 2891 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 2890 AGAGCTCTCAATCTGTC 2874 >seq1545 Length=2210 Score = 358 bits (396), Expect = 1e-96 Identities = 235/257 (91%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 463 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 522 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 523 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 581 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| ||| || | ||||||||||||||||||||||||||||||||||| |||||| Sbjct 582 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 641 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 642 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACA-AATCAAGAA 700 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 701 AGAGCTCTCAATCTGTC 717 >seq1566 Length=25637 Score = 345 bits (382), Expect = 7e-93 Identities = 223/243 (92%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 204 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 |||||||||| |||| || ||| ||||||||||||||||||| || ||| ||| || | Sbjct 203 AAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCGACCCGCCAAAGCGG 145 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 144 GCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACT 85 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| Sbjct 84 CCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCT 25 Query 256 GTC 258 ||| Sbjct 24 GTC 22 >seq329 Length=522 Score = 297 bits (328), Expect = 3e-78 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 241 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 240 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 183 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | ||||||||||||| | ||||||||||||||| ||||| Sbjct 182 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 123 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 122 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 63 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 62 AGAAAGAGCTCTCAGTCTGTC 42 >seq1480 Length=501 Score = 288 bits (318), Expect = 2e-75 Identities = 191/211 (91%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107 |||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||| Sbjct 249 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCT 191 Query 108 CTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167 |||||||||| || ||| ||| || | |||||||||||||||||||||||||||| Sbjct 190 CTAAGAAGCCGGCGACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTC 131 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 71 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || | ||||||||||||||| |||||||||| Sbjct 70 CACAAAATCAAGAAAGAGCTCTCAATCTGTC 40 >seq1476 Length=589 Score = 172 bits (190), Expect = 9e-41 Identities = 103/108 (95%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 227 AGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAAC 168 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 167 GGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 120 >seq1485 Length=744 Score = 156 bits (172), Expect = 7e-36 Identities = 111/126 (88%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 37 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC 96 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| Sbjct 162 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGC 220 Query 97 CAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTA 156 | ||||||||||||||||||| || ||| ||| || | ||||||||||||||||| Sbjct 221 CGATAGTCCCTCTAAGAAGCCGGCGACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTA 280 Query 157 AGGTCT 162 |||||| Sbjct 281 AGGTCT 286 Score = 105 bits (116), Expect = 1e-20 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 343 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 284 Query 62 CCT 64 ||| Sbjct 283 CCT 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784986545