Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 361 9e-98
seq1545 358 1e-96
seq1566 345 7e-93
seq329 297 3e-78
seq1480 288 2e-75
seq1476 172 9e-41
seq1485 156 7e-36
>seq1539
Length=8485
Score = 361 bits (400), Expect = 9e-98
Identities = 235/257 (91%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3129 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3070
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 3069 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 3011
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| ||| || | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3010 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 2951
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 2950 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 2891
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 2890 AGAGCTCTCAATCTGTC 2874
>seq1545
Length=2210
Score = 358 bits (396), Expect = 1e-96
Identities = 235/257 (91%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 522
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 523 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 581
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| ||| || | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 582 ACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 641
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 642 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACA-AATCAAGAA 700
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 701 AGAGCTCTCAATCTGTC 717
>seq1566
Length=25637
Score = 345 bits (382), Expect = 7e-93
Identities = 223/243 (92%), Gaps = 1/243 (0%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 263 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 204
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135
|||||||||| |||| || ||| ||||||||||||||||||| || ||| ||| || |
Sbjct 203 AAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCGACCCGCCAAAGCGG 145
Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 144 GCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACT 85
Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255
|||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||
Sbjct 84 CCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCT 25
Query 256 GTC 258
|||
Sbjct 24 GTC 22
>seq329
Length=522
Score = 297 bits (328), Expect = 3e-78
Identities = 224/261 (86%), Gaps = 6/261 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 241
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | |||||||||||||||||| |
Sbjct 240 CCTGTTATTGCCTCAAACTTCCGTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 183
Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | || | ||||||||||||| | ||||||||||||||| |||||
Sbjct 182 CCGTGGAGGGTTACCTCCACATAGCTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 123
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 63
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||| ||||||
Sbjct 62 AGAAAGAGCTCTCAGTCTGTC 42
>seq1480
Length=501
Score = 288 bits (318), Expect = 2e-75
Identities = 191/211 (91%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107
|||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||
Sbjct 249 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCT 191
Query 108 CTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167
|||||||||| || ||| ||| || | ||||||||||||||||||||||||||||
Sbjct 190 CTAAGAAGCCGGCGACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTC 131
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 71
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| | ||||||||||||||| ||||||||||
Sbjct 70 CACAAAATCAAGAAAGAGCTCTCAATCTGTC 40
>seq1476
Length=589
Score = 172 bits (190), Expect = 9e-41
Identities = 103/108 (95%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 227 AGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAAC 168
Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 167 GGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 120
>seq1485
Length=744
Score = 156 bits (172), Expect = 7e-36
Identities = 111/126 (88%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 37 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC 96
||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||
Sbjct 162 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGC 220
Query 97 CAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTA 156
| ||||||||||||||||||| || ||| ||| || | |||||||||||||||||
Sbjct 221 CGATAGTCCCTCTAAGAAGCCGGCGACCCGCCAAAGCGGGCCTGGCTATTTAGCAGGTTA 280
Query 157 AGGTCT 162
||||||
Sbjct 281 AGGTCT 286
Score = 105 bits (116), Expect = 1e-20
Identities = 61/63 (97%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 284
Query 62 CCT 64
|||
Sbjct 283 CCT 281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796784986545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |