Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1539 518 6e-145 seq861 480 1e-133 seq1630 381 1e-103 seq752 370 2e-100 seq753 313 4e-83 seq986 288 2e-75 seq1786 282 7e-74 seq593 280 3e-73 seq976 109 9e-22 seq1244 91.5 3e-16 >seq1539 Length=8485 Score = 518 bits (574), Expect = 6e-145 Identities = 292/295 (99%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 6872 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 6813 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6812 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6753 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6752 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 6693 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6692 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6633 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6632 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6578 >seq861 Length=518 Score = 480 bits (532), Expect = 1e-133 Identities = 273/283 (96%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 13 TTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAA 72 || | || | |||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct 85 TTWYSAWTGSRWCSACGGTCATCAGTAGGGTAMAACTAACCTGTCTCACGACGGTCTAAA 144 Query 73 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 204 Query 133 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 264 Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 265 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 324 Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 325 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 367 >seq1630 Length=1129 Score = 381 bits (422), Expect = 1e-103 Identities = 220/231 (95%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 725 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 784 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 785 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 844 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 845 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 904 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||| || |||||||| |||| | |||||| ||| | Sbjct 905 GAACGCTTGGCTGCCACAWGCSAGTTATCCYWGTGGWARCTTTTCKGGCRC 955 >seq752 Length=447 Score = 370 bits (410), Expect = 2e-100 Identities = 231/253 (91%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 353 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 294 Query 61 TGAC-GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 CGACAGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 234 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 233 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 174 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT-CTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||| ||||| ||| || || || ||| Sbjct 173 TGAACGCTTGGCTGCCACAAGCCAGTTATHCCTGTSRYRWCTTYWACTSGCWMCTSKAGC 114 Query 239 CTCAAATTTCGAG 251 | |||||| || Sbjct 113 --CGAATTTCCAG 103 >seq753 Length=520 Score = 313 bits (346), Expect = 4e-83 Identities = 176/182 (97%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173 | ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 170 TYACCGAWTTCTSYTTCGRWATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 229 Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 230 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 289 Query 234 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 349 Query 294 AC 295 || Sbjct 350 AC 351 >seq986 Length=581 Score = 288 bits (318), Expect = 2e-75 Identities = 161/162 (99%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 60 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTTCAAATTTCGAGGG 120 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 162 >seq1786 Length=772 Score = 282 bits (312), Expect = 7e-74 Identities = 161/164 (98%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 37 GTAYGAKAGGAAGAGCCGACATCGAAGGATCAAAA-GCAACGTCGCTATGAACGCTTGGC 95 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 155 Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 156 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 199 >seq593 Length=666 Score = 280 bits (310), Expect = 3e-73 Identities = 166/173 (96%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 666 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 607 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 606 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 547 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 546 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 494 >seq976 Length=425 Score = 109 bits (120), Expect = 9e-22 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 1 >seq1244 Length=970 Score = 91.5 bits (100), Expect = 3e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTG 55 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 472 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854383381920