Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 518 6e-145
seq861 480 1e-133
seq1630 381 1e-103
seq752 370 2e-100
seq753 313 4e-83
seq986 288 2e-75
seq1786 282 7e-74
seq593 280 3e-73
seq976 109 9e-22
seq1244 91.5 3e-16
>seq1539
Length=8485
Score = 518 bits (574), Expect = 6e-145
Identities = 292/295 (99%), Gaps = 0/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 6872 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 6813
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6812 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6753
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6752 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 6693
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6692 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6633
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6632 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6578
>seq861
Length=518
Score = 480 bits (532), Expect = 1e-133
Identities = 273/283 (96%), Gaps = 0/283 (0%)
Strand=Plus/Plus
Query 13 TTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAA 72
|| | || | |||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 85 TTWYSAWTGSRWCSACGGTCATCAGTAGGGTAMAACTAACCTGTCTCACGACGGTCTAAA 144
Query 73 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 204
Query 133 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 264
Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 265 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 324
Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 367
>seq1630
Length=1129
Score = 381 bits (422), Expect = 1e-103
Identities = 220/231 (95%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 725 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 784
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 844
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 904
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231
|||||||||||||||||| || |||||||| |||| | |||||| ||| |
Sbjct 905 GAACGCTTGGCTGCCACAWGCSAGTTATCCYWGTGGWARCTTTTCKGGCRC 955
>seq752
Length=447
Score = 370 bits (410), Expect = 2e-100
Identities = 231/253 (91%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 353 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 294
Query 61 TGAC-GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 CGACAGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 234
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 233 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 174
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT-CTGGCACCTCTAGC 238
||||||||||||||||||||||||||||| ||||| ||| || || || |||
Sbjct 173 TGAACGCTTGGCTGCCACAAGCCAGTTATHCCTGTSRYRWCTTYWACTSGCWMCTSKAGC 114
Query 239 CTCAAATTTCGAG 251
| |||||| ||
Sbjct 113 --CGAATTTCCAG 103
>seq753
Length=520
Score = 313 bits (346), Expect = 4e-83
Identities = 176/182 (97%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173
| ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 170 TYACCGAWTTCTSYTTCGRWATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 229
Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 289
Query 234 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 349
Query 294 AC 295
||
Sbjct 350 AC 351
>seq986
Length=581
Score = 288 bits (318), Expect = 2e-75
Identities = 161/162 (99%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 60
Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 61 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCTTCAAATTTCGAGGG 120
Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 162
>seq1786
Length=772
Score = 282 bits (312), Expect = 7e-74
Identities = 161/164 (98%), Gaps = 1/164 (1%)
Strand=Plus/Plus
Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191
||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 37 GTAYGAKAGGAAGAGCCGACATCGAAGGATCAAAA-GCAACGTCGCTATGAACGCTTGGC 95
Query 192 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 96 TGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG 155
Query 252 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 GGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 199
>seq593
Length=666
Score = 280 bits (310), Expect = 3e-73
Identities = 166/173 (96%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 607
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 606 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 547
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 546 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 494
>seq976
Length=425
Score = 109 bits (120), Expect = 9e-22
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 1
>seq1244
Length=970
Score = 91.5 bits (100), Expect = 3e-16
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTG 55
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 472 TACTAAGCGGTATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTG 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854383381920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |