Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1197 185 1e-44 seq1692 181 1e-43 seq1545 181 1e-43 seq1539 181 1e-43 seq1028 170 2e-40 seq1471 168 8e-40 seq1107 149 7e-34 seq1756 98.7 1e-18 >seq1197 Length=400 Score = 185 bits (204), Expect = 1e-44 Identities = 160/193 (83%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 85 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 144 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 145 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 204 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| ||| | |||| || |||||| ||| Sbjct 205 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCTCGGCCGGACCAGTACACGC 263 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 264 GGTGAGGCGGACC 276 >seq1692 Length=715 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 304 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 363 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 364 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 423 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| ||| ||| | || |||||| ||| Sbjct 424 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACGC 482 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 483 GGTGAGGCGGACC 495 >seq1545 Length=2210 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1107 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1166 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 1167 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 1226 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| ||| ||| | || |||||| ||| Sbjct 1227 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACGC 1285 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 1286 GGTGAGGCGGACC 1298 >seq1539 Length=8485 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 2485 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2426 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 2425 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 2366 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| ||| ||| | || |||||| ||| Sbjct 2365 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACGC 2307 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 2306 GGTGAGGCGGACC 2294 >seq1028 Length=939 Score = 170 bits (188), Expect = 2e-40 Identities = 159/194 (82%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 352 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 411 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTC-AAGGTAAAAGTCCTGGTTCCTCCGC 124 || | |||||||||||||||||||||||| || |||||||||||||| ||||| | | Sbjct 412 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGGTAAAAGTCCT-GTTCCCCGAC 470 Query 125 AC-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCG 181 || ||| |||| ||||| | ||||| ||| ||| ||| | || |||||| || Sbjct 471 ACGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACG 529 Query 182 CCGTGAGGCGGACC 195 | |||||||||||| Sbjct 530 CGGTGAGGCGGACC 543 >seq1471 Length=735 Score = 168 bits (186), Expect = 8e-40 Identities = 123/140 (88%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 388 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 329 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 328 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 269 Query 126 C-ACCAATGAA-GGCATACG 143 | ||| |||| |||||||| Sbjct 268 CGCCCAGTGAAGGGCATACG 249 >seq1107 Length=540 Score = 149 bits (164), Expect = 7e-34 Identities = 155/193 (80%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG-GGC 68 ||||||||||||||| | |||||||||||||||||||||||||||||||||||| || Sbjct 398 AAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGAAGC 339 Query 69 GTAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGT-AAAAGTCCT-GGTTCCTCCGCA 125 | |||||||||||||||||||| |||| |||| || ||||||||| |||||| | || Sbjct 338 AAAGGCCTGCTTTGAACACTCTAATTTTTTTCAAAGTAAAAAGTCCTGGGTTCCCCGACA 279 Query 126 C-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 | ||| |||| ||||| | ||||| ||| ||| ||| | || |||||| ||| Sbjct 278 CGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTACACGC 220 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 219 GGTGAGGCGGACC 207 >seq1756 Length=1061 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/142 (78%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 58 TGTATT-CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 |||||| || || | |||||||||||||||||||||||| |||| |||||||||||||| Sbjct 753 TGTATTACGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGT 812 Query 117 TCCTCCGCAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGC 173 ||| | ||| ||| |||| ||||| | ||||| ||| ||| ||| | || | Sbjct 813 TCCCCGACACGCCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACC 871 Query 174 AGTACTCGCCGTGAGGCGGACC 195 ||||| ||| |||||||||||| Sbjct 872 AGTACACGCGGTGAGGCGGACC 893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595188785130