Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1545 544 2e-152
seq1539 544 2e-152
seq1485 365 9e-99
seq1882 329 6e-88
seq329 313 5e-83
seq1566 268 2e-69
seq1480 210 4e-52
>seq1545
Length=2210
Score = 544 bits (602), Expect = 2e-152
Identities = 306/309 (99%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 568
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 508
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 448
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 388
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 387 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 328
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 327 CCCTTTGTA 319
>seq1539
Length=8485
Score = 544 bits (602), Expect = 2e-152
Identities = 306/309 (99%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2965 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 3024
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3025 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3084
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3085 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 3144
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3145 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3204
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 3205 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 3264
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3265 CCCTTTGTA 3273
>seq1485
Length=744
Score = 365 bits (404), Expect = 9e-99
Identities = 205/207 (99%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 340
Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 400
Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 401 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCAT 460
Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||||||||
Sbjct 461 GCGTTGATTACGTCCCTGCCCTTTGTA 487
Score = 226 bits (250), Expect = 5e-57
Identities = 125/125 (100%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 227
Query 85 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 CTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 167
Query 145 TCTGG 149
|||||
Sbjct 166 TCTGG 162
>seq1882
Length=1003
Score = 329 bits (364), Expect = 6e-88
Identities = 186/189 (98%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 GAYGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 747
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 746 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 687
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 686 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 627
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 626 CCCTTTGTA 618
>seq329
Length=522
Score = 313 bits (346), Expect = 5e-83
Identities = 230/264 (87%), Gaps = 4/264 (2%)
Strand=Plus/Plus
Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124
||| |||||||||||||||||| | ||| | ||| | ||||||||||||||||||||||
Sbjct 182 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCC-ACGGAAGTTTGAGGCAATAACAGG 240
Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 241 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 300
Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244
|| ||||||||| ||||| |||||||||| | ||| | ||||| ||||||||||
Sbjct 301 CTATAGCCTTGGCCGACAGGTCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 359
Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304
|||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||||
Sbjct 360 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 419
Query 305 TTGATTACGTCCCTGCCCTTTGTA 328
|||| |||||||||||||||||||
Sbjct 420 TTGACTACGTCCCTGCCCTTTGTA 443
>seq1566
Length=25637
Score = 268 bits (296), Expect = 2e-69
Identities = 150/151 (99%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 113 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 172
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 232
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGA 170
|||||||||||||||||||||||||||||||
Sbjct 233 GATGTTCTGGGCCGCACGCGCGCTACACTGA 263
>seq1480
Length=501
Score = 210 bits (232), Expect = 4e-52
Identities = 118/119 (99%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 131 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 190
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947181576960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |