Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201
7-07-13] 1,945 sequences; 34,940,764 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1630 223 6e-56
seq1539 223 6e-56
seq440 199 6e-49
seq1244 185 1e-44
seq187 87.8 3e-15
seq1156 80.6 4e-13
seq861 80.6 4e-13
>seq1630
Length=1129
Score = 223 bits (246), Expect = 6e-56
Identities = 151/167 (90%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 727 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 670
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 669 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 610
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
||||||| ||| |||||| |||| | ||| |||||| ||||||||
Sbjct 609 GAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATAAGAATAGGC 563
>seq1539
Length=8485
Score = 223 bits (246), Expect = 6e-56
Identities = 151/167 (90%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 6870 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6927
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 6928 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 6987
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
||||||| ||| |||||| |||| | ||| |||||| ||||||||
Sbjct 6988 GAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATAAGAATAGGC 7034
>seq440
Length=489
Score = 199 bits (220), Expect = 6e-49
Identities = 129/139 (93%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 139 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 82
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 81 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 22
Query 121 GAACGGGGTGATTCTCTCC 139
||||||| ||| ||||||
Sbjct 21 GAACGGGACGATCCTCTCC 3
>seq1244
Length=970
Score = 185 bits (204), Expect = 1e-44
Identities = 117/124 (94%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 470 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 527
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 528 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 587
Query 121 GAAC 124
||||
Sbjct 588 GAAC 591
>seq187
Length=242351
Score = 87.8 bits (96), Expect = 3e-15
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 72 ACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA 131
||||||||||||||| ||||||||||||||||||| ||||||||||||||| | | |
Sbjct 60820 ACCATCTGCTGGATTCTGGCTGAACGCCTCTAAGTTAGAATCCATGCCAGAGCAGACCAA 60879
Query 132 TTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167
| ||| | |||| | | | ||||| ||||||||
Sbjct 60880 TCTTCTGCAGCACGCCTTGGGCGGATGTGAATAGGC 60915
>seq1156
Length=731
Score = 80.6 bits (88), Expect = 4e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 99 CTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATA 158
|||||||| |||||||||||||||||||| ||| |||||| |||| | ||| ||||||
Sbjct 252 CTCTAAGTTAGAATCCATGCCAGAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATA 311
Query 159 CGAATAGGC 167
||||||||
Sbjct 312 AGAATAGGC 320
>seq861
Length=518
Score = 80.6 bits (88), Expect = 4e-13
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATC 77
| |||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 468 AKAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATC 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819184564480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |