Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1630 223 6e-56 seq1539 223 6e-56 seq440 199 6e-49 seq1244 185 1e-44 seq187 87.8 3e-15 seq1156 80.6 4e-13 seq861 80.6 4e-13 >seq1630 Length=1129 Score = 223 bits (246), Expect = 6e-56 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 727 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 670 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 669 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 610 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 ||||||| ||| |||||| |||| | ||| |||||| |||||||| Sbjct 609 GAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATAAGAATAGGC 563 >seq1539 Length=8485 Score = 223 bits (246), Expect = 6e-56 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 6870 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6927 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 6928 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 6987 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 ||||||| ||| |||||| |||| | ||| |||||| |||||||| Sbjct 6988 GAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATAAGAATAGGC 7034 >seq440 Length=489 Score = 199 bits (220), Expect = 6e-49 Identities = 129/139 (93%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 139 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 82 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 81 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 22 Query 121 GAACGGGGTGATTCTCTCC 139 ||||||| ||| |||||| Sbjct 21 GAACGGGACGATCCTCTCC 3 >seq1244 Length=970 Score = 185 bits (204), Expect = 1e-44 Identities = 117/124 (94%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||| Sbjct 470 GTACGAGAGGAACCGCGGT-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 527 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 528 GCCGCGAAGCTACCATCTGCTGGATTATAGCTGAACGCCTCTAAGTTAGAATCCATGCCA 587 Query 121 GAAC 124 |||| Sbjct 588 GAAC 591 >seq187 Length=242351 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 72 ACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA 131 ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | | | Sbjct 60820 ACCATCTGCTGGATTCTGGCTGAACGCCTCTAAGTTAGAATCCATGCCAGAGCAGACCAA 60879 Query 132 TTCTCTCCTGCACATCGTAGTCGGATACGAATAGGC 167 | ||| | |||| | | | ||||| |||||||| Sbjct 60880 TCTTCTGCAGCACGCCTTGGGCGGATGTGAATAGGC 60915 >seq1156 Length=731 Score = 80.6 bits (88), Expect = 4e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 99 CTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATA 158 |||||||| |||||||||||||||||||| ||| |||||| |||| | ||| |||||| Sbjct 252 CTCTAAGTTAGAATCCATGCCAGAACGGGACGATCCTCTCCAGCACGCCTTAGGCGGATA 311 Query 159 CGAATAGGC 167 |||||||| Sbjct 312 AGAATAGGC 320 >seq861 Length=518 Score = 80.6 bits (88), Expect = 4e-13 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATC 77 | |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 468 AKAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATC 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819184564480