Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1539 861 0.0 seq1545 841 0.0 seq917 614 2e-173 seq257 614 2e-173 seq1829 480 2e-133 seq1610 374 3e-101 seq1798 149 2e-33 seq1756 84.2 7e-14 >seq1539 Length=8485 Score = 861 bits (954), Expect = 0.0 Identities = 494/504 (98%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2158 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2099 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2098 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2039 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 2038 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1979 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1978 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1919 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| Sbjct 1918 CAAGGCCATGCGATTCGTGAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGT 1859 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1858 TTTTTATCTAATAAATACACCCCTTCCGAAGTTGGGGTTTTTAGCATGTATTAGCTCTAG 1799 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1739 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1738 GCCATTCGCAGTTTCACCGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1680 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 1679 AGACAAGCATATGACTACTGGCAG 1656 >seq1545 Length=2210 Score = 841 bits (932), Expect = 0.0 Identities = 491/504 (97%), Gaps = 4/504 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1434 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC- 1492 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1493 -CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1551 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1552 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1611 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1612 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATT-GAATGAACCATCGCCGGCG 1670 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| Sbjct 1671 CAAGGCCATGCGATTCGTGAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGT 1730 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1731 TTTTTATCTAATAAATACACCCCTTCCGAAGTTGGGGTTTTTAGCATGTATTAGCTCTAG 1790 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1791 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 1850 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1851 GCCATTCGCAGTTTCACCGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 1909 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 1910 AGACAAGCATATGACTACTGGCAG 1933 >seq917 Length=739 Score = 614 bits (680), Expect = 2e-173 Identities = 356/365 (98%), Gaps = 1/365 (0%) Strand=Plus/Plus Query 65 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 164 GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 223 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 224 AGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTAGGCC 283 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAG 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 284 TCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAG 343 Query 245 GCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTT 304 |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 344 GCCATGCGATTCGTGAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGTTTTT 403 Query 305 TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATT 364 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 404 TATCTAATAAATACACCCCTTCCGAAGTTGGGGTTTTTAGCATGTATTAGCTCTAGAATT 463 Query 365 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGC-C 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 464 ACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCGC 523 Query 424 ATTCG 428 ||||| Sbjct 524 ATTCG 528 >seq257 Length=1205 Score = 614 bits (680), Expect = 2e-173 Identities = 447/511 (87%), Gaps = 9/511 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| ||| |||||| |||| |||||||||||||||||| Sbjct 524 GTACTCATTCCAATTACCAGACTCAAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 466 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 406 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 405 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 346 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 345 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 286 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----G 295 | |||||| |||||| || |||||| |||||||| ||| | | | || || | Sbjct 285 CAAAGGCCGTGCGATCCGACGAGTTATCATGAATCATCAAAGCAACAGGCAGAGCCTGTG 226 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAG 354 ||| ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||||| Sbjct 225 TTGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAG 166 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 |||||||||||| |||||||||| ||||| || ||| |||||| |||| |||||||||| Sbjct 165 CTCTAGAATTACTACGGTTATCCGAGTAGT-AGATACCATCAAACAAACTATAACTGATT 107 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTA 473 ||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||||| Sbjct 106 TAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTA 47 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 46 ATCTTTGAGACAAGCATATGACTACTGGCAG 16 >seq1829 Length=405 Score = 480 bits (532), Expect = 2e-133 Identities = 283/292 (97%), Gaps = 2/292 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA-GAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 292 GTACTCATTCCAATTACAAGACCCAAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 233 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 173 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 172 TTCTCAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGT 113 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 AGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 53 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATT-ATGAATCACCAAGGAGCCCCGAA 290 ||||||||||| |||||| |||||||| |||| |||||||||||||||||| Sbjct 52 GCAAGGCCATGCRATTCGTGAAGTTATTAATGATTCACCAAGGAGCCCCGAA 1 >seq1610 Length=691 Score = 374 bits (414), Expect = 3e-101 Identities = 224/238 (94%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 267 TATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC 326 ||||| || || || ||| ||| | ||||||||||||||||||||||||||||||| Sbjct 668 TATGATTCWCCMAGRAGCYSCGAWKK-CATTGGTTTTTTATCTAATAAATACACCCCTTC 610 Query 327 CGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 386 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 CGAAGTTGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA 550 Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 549 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATAG-T 491 Query 447 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 490 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 433 >seq1798 Length=554 Score = 149 bits (164), Expect = 2e-33 Identities = 87/89 (98%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 145 AATGAGCCATTCGCAGTTTCACCGTATAG-TTGCTTATACTTAGACATGCATGGCTTAAT 203 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 204 CTTTGAGACAAGCATATGACTACTGGCAG 232 >seq1756 Length=1061 Score = 84.2 bits (92), Expect = 7e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370622720