Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq411 284 1e-71 seq680 239 4e-58 >seq411 Length=240905 Score = 284 bits (314), Expect = 1e-71 Identities = 649/968 (67%), Gaps = 24/968 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || ||||||||||| |||||||| || || | |||||| || ||||| ||||| | Sbjct 124651 GGCAGAGCAAGAGATGCAAGGTTGCACACGGCGACCTCGTCTGGTGCGGTGTACTCAATG 124592 Query 66062 ATTTCGGTGCACAGATT---ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG 66118 || || ||||||| || ||| | || || || | |||| || || |||||| Sbjct 124591 ATCTCAGTGCACAAGTTGGAACTCTTG---ATCGTTCCGAGGTTCTTCTGGTTGCTCTTG 124535 Query 66119 CGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATG 66178 || ||| ||||||||||| | |||| | || || |||||| |||| || | | Sbjct 124534 CGGTTGGCAGCATCCTTGTAGAGCATGAAAGGTCCACCAGTCTCAGTCTGGGCTTCCAAG 124475 Query 66179 ATGGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT 66232 || || | ||| | ||||||| | || | |||| | | ||||| | Sbjct 124474 ATAGCATACCAGACCTTTTGAGCGCGGACAGTCTC---ACGTCCA---CGACCTTCTCTC 124421 Query 66233 TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACAC 66292 ||||| | ||| || | ||||| ||||| | || || | |||| || ||| Sbjct 124420 TCGTAGCGGGTGTACAGCTCCTCGAACTCGTCACCGTACACATCAGCGAGACCAGGGCAC 124361 Query 66293 TTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCA 66352 | | || ||||| || | ||| || | | ||| ||||| ||| || ||||| Sbjct 124360 TCATTGGGGCACATGAGTGTCCATTCTGCGTTGGCTTCGACACGCTTCATGAACAGATCT 124301 Query 66353 GGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTG 66412 || ||||| || ||| |||| ||||| ||||| || ||||| | ||||| || ||| Sbjct 124300 GGGATCCAAAGAGCGAAGAACAGATCACGTGCACGCACTTCCTCCTTTCCGTGGTTCTTG 124241 Query 66413 CGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAG 66472 || | ||| | ||| | || || || |||||||| || |||||||||||||||| | Sbjct 124240 CGGAGGTCCATGAAGGAGATGACATCTGCGTGCCATGGCTCTAGGTAGATGGCGAACGCG 124181 Query 66473 CCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAAC 66532 || ||| ||| ||||||||||||||| ||||| || || ||| |||| |||||| Sbjct 124180 CCAGGACGCTTGTTGCCACCTTGGTCGACATAGCGGGCAGTGTTATTGTAGACGCGCAAC 124121 Query 66533 ATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGT 66592 ||||| | ||| || || ||| |||| || ||||| | ||| ||||| || || Sbjct 124120 ATCGGGATGAGACCATTGGATGTGCCGTTTGTGCCTGCAATGTATGATCCAGTAGCACGG 124061 Query 66593 ATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC 66652 || | ||| ||||| ||||||||||| || |||||||||| || ||| | Sbjct 124060 ATCTTGTGGCAGTTCAGGCCAATACCACCAGCATTCTTCGAGATCATGGCGCAAGTCTTC 124001 Query 66653 ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA 66712 | ||| | | || || |||||| |||| |||| ||| | | | |||||||| Sbjct 124000 AGTGTGTCGTAGATACCCTCAATGCTGTCATCCTTCATGTCGATCAAGAAGCATGAAGCC 123941 Query 66713 AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGG 66772 | || | || || || | || ||| || || || | |||||| || ||||| | | Sbjct 123940 AACTGTGCATTCGGCGTACCAGCGCTGAACAGTGTAGGCGAAGCGTGTGTGAAGTATTTG 123881 Query 66773 CGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGT 66832 |||||||| ||||| ||||| ||| | || || || | ||||| || || || | Sbjct 123880 TTCGACATGTAGTTGTAGGTCTCAATGGCGGCCTCGATATCGTCGCCGTGGATTCCAACA 123821 Query 66833 G-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC--ATT 66889 | |||| ||||| | | || || || | ||| || | || | | |||| | Sbjct 123820 GCCACA-CGCATGATCATGTGCTGTGGTCTCTCG-GCAACTTTGCCATCA-ATGCGGAGC 123764 Query 66890 AAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGC 66949 ||||| ||||||||||| ||||||| ||||||||| ||| |||||||| | ||| Sbjct 123763 AAGTATGAGCGTTCCAGCGTCTTGAAACCAAAGTATTGGTAGTTGAAATCTCTGTCATAG 123704 Query 66950 ACGATGGC 66957 || ||||| Sbjct 123703 ACAATGGC 123696 Score = 82.4 bits (90), Expect = 6e-11 Identities = 323/496 (65%), Gaps = 18/496 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGC--CTTG-GTCCTAAGATAGTACATGCCG 65134 || || |||||||| |||| | |||| ||| |||| || | || |||||||||||| Sbjct 125557 TCAACAGTGAACTGAATCGGA---GCAGACGCGGCTTGTGTACGGAGGTAGTACATGCCG 125501 Query 65135 GTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGG 65193 ||||| |||||| ||| || || ||||| | || | || |||| | | || Sbjct 125500 GTCTTCAGGCCAAGCTTCCAGCCAGTAAAGTGCAT-GCTGGTGATCTTGCCCATGGTGGG 125442 Query 65194 CTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGC 65253 ||| || || || ||||| ||| ||||||||| | ||| || || || || Sbjct 125441 CTCCTTCAAGTGGATGTTCAAGCTTTGAGATTGATCGATGAAGGCACCGCGGTCCGCGGC 125382 Query 65254 CATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-A 65309 ||| | ||||| | || | | || |||||||| |||||||||| || | | | Sbjct 125381 CATTTGAACAATGTTGCGCTGAC---TGATTTCCCAGACAGTCTTGTACA-ACGCCTTGA 125326 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACC-ACGACGTGCAATAATGCGATTA 65368 || ||||| | | |||| || || ||||| || || || || ||||| || Sbjct 125325 GGTCGTCCGGAATGTTCGGAATGCGTTGCACGGAACCGCCGTCG-GCGATGATGCGGTTC 125267 Query 65369 CGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428 ||| ||| |||||||| || |||| |||| | | ||| | |||| | Sbjct 125266 TTCATGTTCTCAGACCACAATCCACGGTCGACGAGATCCTTCAGCAACCATGGGTTGACG 125207 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || |||| || |||||||| ||||||||| ||| || || ||| Sbjct 125206 ACTTGGAATTCTCCGGCAAGCACACGACGAGAGTAGATGTTGCTAGTGTATGGCTCGAAG 125147 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 | || || ||| | || || | || || ||||| ||||| || || |||| | Sbjct 125146 CACTCGTTGAAGCCCATGATCTGCGATGTGGAGGCAGTAGGCATTGGTGCAACCAGAAGG 125087 Query 65549 GAGTTTCGCAATCCGT 65564 ||||| || | |||| Sbjct 125086 GAGTTGCGGACACCGT 125071 >seq680 Length=821847 Score = 239 bits (264), Expect = 4e-58 Identities = 581/861 (67%), Gaps = 32/861 (4%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||| ||||||||| ||||| || || || |||||||| | || ||| | ||| || Sbjct 340306 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 340365 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||| | ||| | | || || || | ||||| Sbjct 340366 TCCAAGGATCTCCACGACTGGAACAAGCGACTCAATGA-CGACGAGCGCTTCTTCATCTC 340424 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| || | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 340425 ACACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCG 340484 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| | |||||||| | ||||||| || || ||||||||||||||||| | Sbjct 340485 ATTCAGCGCCG-AGGTGCAAATACCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 340543 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | |||||||| || |||||||| |||| Sbjct 340544 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCCA 340603 Query 61382 CGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACCGGCGGTGAA---GCGGA 61435 | | || ||| || | ||||| |||||||| | || || || | || || Sbjct 340604 AGCAGCG--AAC-ATACCTCTTCAACGCCATCGACAACATCCCT----TGTATCCGCAGA 340656 Query 61436 AAG-CGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGA 61491 ||| | || ||||| || | || ||||| | | |||| | || || || | | ||| Sbjct 340657 AAGGCTGACTGGGCACTGCGAT-GGATCTC--GGACAAGGACTCTACTTTCGCTATGCGA 340713 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 ||| | || ||||| | ||||||||| | || ||| || || || || | ||||| Sbjct 340714 TTGATCGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCGTCCATCTTC 340773 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||||||||||| ||||| || ||| | || || |||||| ||| ||| | || || || Sbjct 340774 TGGTTGAAGAAGCGTGGTCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGT 340833 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 |||||||||||||| ||| || ||| |||| ||| | | || ||| Sbjct 340834 GACGAGGGCATGCACACTGACTTCGCTTGCCTGCTGTTCTCTC---ACCTCAAGAACAAG 340890 Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT 61730 || | || | || | || | |||| ||||| || | || || || ||||| Sbjct 340891 CCCGCCAAGTCG-GTCGTGCAAAGCATCATCGTGGAGGCCGTTGCCATTGAGCAAGAATT 340949 Query 61731 TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTA 61790 |||| || ||| |||| | | || |||||||||| | || |||| ||||| Sbjct 340950 CTTGACCGATGCTCTGCCTTGCGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTA 341009 Query 61791 TATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATAC 61850 ||||| ||||| || ||||| ||| || ||| | | || | | | |||| || | Sbjct 341010 CATTGAGTTTGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCTACAACGC 341069 Query 61851 GAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGA 61910 | ||||| || || |||||||| | || || || | |||||||| || || ||||| Sbjct 341070 CACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGA 341129 Query 61911 GAAACGTGTAGGCGACTATCA 61931 ||| ||||| |||||||| || Sbjct 341130 GAAGCGTGTTGGCGACTACCA 341150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558575774800