Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20cf._20sigesbeckiae_20[genbank_20GCA_5F002217505.1_20201 7-07-13] 1,945 sequences; 34,940,764 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq248 89.7 2e-12 seq679 84.2 8e-11 >seq248 Length=455173 Score = 89.7 bits (98), Expect = 2e-12 Identities = 178/261 (68%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 12728 TTGAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGA 12787 |||| |||||||| ||| || |||| || ||| ||||||| || ||||| | || Sbjct 368802 TTGATGACATCGTAGTAGATGACCCTCATACCCAGAGACTCTGCGAGAACAGAAAGTTGG 368743 Query 12788 GAACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCT 12847 | |||| | || ||||| || || || || ||||||||||| ||||| | ||| ||| Sbjct 368742 GCTCCAACATGTCCGTAACCAACGATGCCCAGCGTCTTTCCTCTTACTTCCCAGCAGCCT 368683 Query 12848 TGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGA 12907 ||| ||| ||||| |||| | ||| | ||| |||||| || || | ||| ||| Sbjct 368682 GCAGAGACCTTATTCCATGTGCCATTGTGCATTTCGGTGTTTCGGTCGCCGATCTGTCGA 368623 Query 12908 GAAAGATTAATTAGTTGT-CCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGG 12966 | | || | | || || || || |||| |||||| | | |||| | ||||| Sbjct 368622 GCCAACGCGATGA-TCGTGCCAATCATTTGCTCAGCCACGGAACGTGAGTTGGAGAAGGG 368564 Query 12967 AGAATTAAAGACTGCAATGCC 12987 || || ||||| || || || Sbjct 368563 CGAGTTGAAGACGGCGATACC 368543 >seq679 Length=230803 Score = 84.2 bits (92), Expect = 8e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 364383 GCAAGGCTCCCACCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGAGG 364442 ||||||| || |||||||| | | ||| || | | | |||| ||||||||| || Sbjct 199593 GCAAGGCGCCAACCTTGGAAAGCAAACACTCGATCAAGTGAGCAATGGTCATACGACTGG 199534 Query 364443 GAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATAT 364502 |||| | | | ||||||||||||||||| ||| | ||||| ||| | || ||||| | Sbjct 199533 GAATAGCGTGGGGGTTGATGATGATGTCGGGCGTGAGACCGTCCGCGCTGAACGGCATGT 199474 Query 364503 -CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTG 364561 || | | || | | ||| ||| || || ||||| || | | || ||||||||||| Sbjct 199473 CCTCCTGTCGGTAAG-TGATACCGATTGTACCCTTCTGTCCGTGACGGGAAGCAAACTTA 199415 Query 364562 TCGCCAAT 364569 || || || Sbjct 199414 TCACCGAT 199407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884839428041885