Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercospora_20sojina_20[genbank_20GCA_5F002150695.1_202017-05-19] 144 sequences; 15,477,581 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq59 223 3e-53 >seq59 Length=213647 Score = 223 bits (246), Expect = 3e-53 Identities = 575/858 (67%), Gaps = 26/858 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || ||| ||||||||| ||||| || || || |||||||| | || ||| | ||| || Sbjct 94666 ATATGGAACATGTACAAGAAGGCCGAGGCATCATTCTGGACTGCCGAAGAGATTGATCTG 94607 Query 61147 TCCAAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || || | | |||||| | ||| | | || || || | ||||| Sbjct 94606 TCAAAGGATCTCCACGACTGGAACAAGCGACTCAATGA-CGACGAGCGCTTCTTCATCTC 94548 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| || | || ||||| ||||| || ||||| || ||||| ||||| | | || || Sbjct 94547 ACACGTCCTTGCATTCTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTGGTCGAGCG 94488 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| |||| | |||||||| | | || || || || ||||||||||||||||| | Sbjct 94487 ATTCAGCGCCG-AGGTGCAAATACCCGAAGCACGATGCTTCTACGGCTTCCAGATCATGA 94429 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | |||||||| || |||||||| |||| Sbjct 94428 TGGAGAACATCCACTCCGAGACATACTCCCTCCTCATCGACACATACATCAGCGAGCCTA 94369 Query 61382 CGGAACGTGAACGAT---TGTTCAATGCCATCGAGACGATACC-GGCGGTGAAGCGGAAA 61437 | ||| |||| || ||||||| |||||||| | || || || | || |||| Sbjct 94368 AGCAAC--GAAC-ATACCTGTTCAACGCCATCGACAACATCCCATGCATT--CGCAGAAA 94314 Query 61438 -GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTG 61494 || || |||||| | |||||| | | |||| | || || || | | ||| || Sbjct 94313 GGCTGACTGGGCCCTGCGATGGATCTC--GGACAAGGACTCGACGTTCGCTATGCGACTG 94256 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||| | ||||||||| | || ||| || || || || | ||||| ||| Sbjct 94255 ATTGCCTTTGCTGCTGTCGAGGGTATCTTCTTCTCCGGCTCATTCGCATCCATCTTCTGG 94196 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 |||||||| ||||| || ||| | || || |||||| ||| ||| | || || |||||| Sbjct 94195 TTGAAGAAGCGTGGCCTCATGGCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGAC 94136 Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 ||||||||||| ||| || ||| || | ||| | | || ||| || Sbjct 94135 GAGGGCATGCACACTGACTTCGCTTGCCTGTTGTTCTCTC---ACCTCAAGAACAAGCCC 94079 Query 61675 TCGGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 | || | ||| | || || || ||||| || | || || || ||||| | Sbjct 94078 ACCAAGTCG-GTGGTGCAAAGCATCATTGTGGAGGCCGTCGCCATTGAGCAAGAATTCTT 94020 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 ||| || || ||||| | || |||||||||| | || |||| ||||| || Sbjct 94019 GACCGATGCCTTGCCTTGTGCGCTGCTCGGCATGAACGCTAAGCTCATGTGCCAGTACAT 93960 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 ||| || || || ||||| ||| || ||| | | || | | | |||| || | | Sbjct 93959 TGAGTTCGTCGCTGACCGACTGCTGCTCGCTCTTGGCAACCAAAAGTTCTACAACGCCAC 93900 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||| | || || || | |||||||| || || |||||||| Sbjct 93899 CAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAA 93840 Query 61914 ACGTGTAGGCGACTATCA 61931 ||||| |||||||| || Sbjct 93839 GCGTGTTGGCGACTACCA 93822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567302268160