Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq5896 149 3e-34 seq4973 149 3e-34 seq4457 149 3e-34 seq3614 149 3e-34 seq5154 147 1e-33 seq5477 141 5e-32 seq5462 138 6e-31 seq5608 136 2e-30 seq4908 132 3e-29 seq5645 127 1e-27 seq5456 123 1e-26 seq5596 98.7 6e-19 seq5215 95.1 7e-18 seq4125 95.1 7e-18 seq5773 87.8 1e-15 seq5805 71.6 8e-11 >seq5896 Length=211 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 204 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 146 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 145 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 89 >seq4973 Length=302 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 119 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 177 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 178 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 234 >seq4457 Length=383 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 230 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 288 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 289 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 345 >seq3614 Length=1072 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 276 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 218 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 217 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 161 >seq5154 Length=283 Score = 147 bits (162), Expect = 1e-33 Identities = 101/113 (89%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64 ||||| | |||||||| |||||||||||||| || ||||||| ||||| || |||||| Sbjct 283 CCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGATC 225 Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 224 CCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 172 >seq5477 Length=245 Score = 141 bits (156), Expect = 5e-32 Identities = 102/115 (89%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63 |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||||| Sbjct 243 CCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGAT 185 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTA-TCTGATCGTCTTCGA 117 ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 184 CCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTACTCTGATCGTCTTCGA 130 >seq5462 Length=248 Score = 138 bits (152), Expect = 6e-31 Identities = 101/115 (88%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 113 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 55 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||| ||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 54 GATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTC 1 >seq5608 Length=234 Score = 136 bits (150), Expect = 2e-30 Identities = 97/110 (88%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 126 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 184 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 185 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCG 234 >seq4908 Length=310 Score = 132 bits (146), Expect = 3e-29 Identities = 95/108 (88%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 204 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 262 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 |||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 263 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGAT 310 >seq5645 Length=232 Score = 127 bits (140), Expect = 1e-27 Identities = 102/119 (86%), Gaps = 3/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTT-GATTTCT-CGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC 58 || |||||| ||||| ||||| | ||||||||||||| || ||||||| ||| || Sbjct 172 GAGCCCAAACACTTTTGATTTATTCGTAAGGTGCCGAACGGGTCAAAAAATAAACGCCGT 113 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 112 CCGATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 55 >seq5456 Length=248 Score = 123 bits (136), Expect = 1e-26 Identities = 89/100 (89%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 19 TTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAG 78 || |||||||||||||| || ||||||| ||||| || |||||||||| ||||||||| Sbjct 1 TTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGATCCCTAATCGGCATAG 59 Query 79 TTTACGGTTAAGACTACGACGGTATCTGATCGT-CTTCGA 117 |||| |||||||||||||||||||||||||||| |||||| Sbjct 60 TTTATGGTTAAGACTACGACGGTATCTGATCGTCCTTCGA 99 >seq5596 Length=236 Score = 98.7 bits (108), Expect = 6e-19 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 234 CCGATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 176 >seq5215 Length=276 Score = 95.1 bits (104), Expect = 7e-18 Identities = 63/69 (91%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||| || |||||||||| ||||||||||| | ||||||||||||||||||||||||| Sbjct 271 ATAACGCCGTCCGATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGAT 213 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 212 CGTCTTCGA 204 >seq4125 Length=507 Score = 95.1 bits (104), Expect = 7e-18 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 57 >seq5773 Length=221 Score = 87.8 bits (96), Expect = 1e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 221 CCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 169 >seq5805 Length=218 Score = 71.6 bits (78), Expect = 8e-11 Identities = 59/71 (83%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| | |||||||| |||||||||||||| || ||||||| ||||| || || Sbjct 149 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAA-AATAACGCCGTCC 207 Query 61 GATCCCTAGTC 71 |||||||| || Sbjct 208 GATCCCTAATC 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278384246040