Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq5896 149 3e-34
seq4973 149 3e-34
seq4457 149 3e-34
seq3614 149 3e-34
seq5154 147 1e-33
seq5477 141 5e-32
seq5462 138 6e-31
seq5608 136 2e-30
seq4908 132 3e-29
seq5645 127 1e-27
seq5456 123 1e-26
seq5596 98.7 6e-19
seq5215 95.1 7e-18
seq4125 95.1 7e-18
seq5773 87.8 1e-15
seq5805 71.6 8e-11
>seq5896
Length=211
Score = 149 bits (164), Expect = 3e-34
Identities = 104/117 (89%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 204 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 146
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 145 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 89
>seq4973
Length=302
Score = 149 bits (164), Expect = 3e-34
Identities = 104/117 (89%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 119 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 177
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 178 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 234
>seq4457
Length=383
Score = 149 bits (164), Expect = 3e-34
Identities = 104/117 (89%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 230 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 288
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 289 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 345
>seq3614
Length=1072
Score = 149 bits (164), Expect = 3e-34
Identities = 104/117 (89%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 276 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 218
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 217 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 161
>seq5154
Length=283
Score = 147 bits (162), Expect = 1e-33
Identities = 101/113 (89%), Gaps = 1/113 (1%)
Strand=Plus/Minus
Query 5 CCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64
||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||||||
Sbjct 283 CCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGATC 225
Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 224 CCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 172
>seq5477
Length=245
Score = 141 bits (156), Expect = 5e-32
Identities = 102/115 (89%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63
|||||| | |||||||| |||||||||||||| || ||||||| ||||| || |||||
Sbjct 243 CCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGAT 185
Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTA-TCTGATCGTCTTCGA 117
||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 184 CCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTACTCTGATCGTCTTCGA 130
>seq5462
Length=248
Score = 138 bits (152), Expect = 6e-31
Identities = 101/115 (88%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 113 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 55
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||||||| ||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 54 GATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTC 1
>seq5608
Length=234
Score = 136 bits (150), Expect = 2e-30
Identities = 97/110 (88%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 126 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 184
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 185 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCG 234
>seq4908
Length=310
Score = 132 bits (146), Expect = 3e-29
Identities = 95/108 (88%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 204 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCC 262
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
|||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 263 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGAT 310
>seq5645
Length=232
Score = 127 bits (140), Expect = 1e-27
Identities = 102/119 (86%), Gaps = 3/119 (3%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTT-GATTTCT-CGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC 58
|| |||||| ||||| ||||| | ||||||||||||| || ||||||| ||| ||
Sbjct 172 GAGCCCAAACACTTTTGATTTATTCGTAAGGTGCCGAACGGGTCAAAAAATAAACGCCGT 113
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 112 CCGATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 55
>seq5456
Length=248
Score = 123 bits (136), Expect = 1e-26
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 19 TTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAG 78
|| |||||||||||||| || ||||||| ||||| || |||||||||| |||||||||
Sbjct 1 TTATCGTAAGGTGCCGAACGGGTCAAAAA-ATAACGCCGTCCGATCCCTAATCGGCATAG 59
Query 79 TTTACGGTTAAGACTACGACGGTATCTGATCGT-CTTCGA 117
|||| |||||||||||||||||||||||||||| ||||||
Sbjct 60 TTTATGGTTAAGACTACGACGGTATCTGATCGTCCTTCGA 99
>seq5596
Length=236
Score = 98.7 bits (108), Expect = 6e-19
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 234 CCGATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 176
>seq5215
Length=276
Score = 95.1 bits (104), Expect = 7e-18
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand=Plus/Minus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
||||| || |||||||||| ||||||||||| | |||||||||||||||||||||||||
Sbjct 271 ATAACGCCGTCCGATCCCTAATCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGAT 213
Query 109 CGTCTTCGA 117
|||||||||
Sbjct 212 CGTCTTCGA 204
>seq4125
Length=507
Score = 95.1 bits (104), Expect = 7e-18
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 GATCCCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 57
>seq5773
Length=221
Score = 87.8 bits (96), Expect = 1e-15
Identities = 51/53 (96%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 221 CCTAATCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 169
>seq5805
Length=218
Score = 71.6 bits (78), Expect = 8e-11
Identities = 59/71 (83%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| | |||||||| |||||||||||||| || ||||||| ||||| || ||
Sbjct 149 GAGCCCAAACATTTTGATTTATCGTAAGGTGCCGAACGGGTCAAAA-AATAACGCCGTCC 207
Query 61 GATCCCTAGTC 71
|||||||| ||
Sbjct 208 GATCCCTAATC 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278384246040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |