Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3947 113 1e-22 >seq3947 Length=637 Score = 113 bits (124), Expect = 1e-22 Identities = 196/280 (70%), Gaps = 14/280 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 430 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 371 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | ||||| |||||||||||||||| Sbjct 370 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCGTTTCGCTACCTTAGGA 311 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC------GATCAAGAGCTTCGCGTTA 180 || | | | || ||||||| || ||||||| ||| ||||| | ||| | | Sbjct 310 CCCTCA-CGCTAAGGCCGCCATTAACCGGGGGTTCCTCTAAAATCAA-ACCTT----TCA 257 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | | || |||||| |||||| ||||||| |||||| | |||| | | || Sbjct 256 ATTTAAAAAATTCGTTAACCAGCCGGCATCGGGCAGAAATCACACTCAATACTTAGATTT 197 Query 241 -TCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | |||||| |||||| |||||| | |||||||||| Sbjct 196 ATCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260723898112