Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3947 113 1e-22
>seq3947
Length=637
Score = 113 bits (124), Expect = 1e-22
Identities = 196/280 (70%), Gaps = 14/280 (5%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||||| | ||||||||
Sbjct 430 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 371
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
|||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||
Sbjct 370 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAAGGCGTTTCGCTACCTTAGGA 311
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC------GATCAAGAGCTTCGCGTTA 180
|| | | | || ||||||| || ||||||| ||| ||||| | ||| | |
Sbjct 310 CCCTCA-CGCTAAGGCCGCCATTAACCGGGGGTTCCTCTAAAATCAA-ACCTT----TCA 257
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| | || |||||| |||||| ||||||| |||||| | |||| | | ||
Sbjct 256 ATTTAAAAAATTCGTTAACCAGCCGGCATCGGGCAGAAATCACACTCAATACTTAGATTT 197
Query 241 -TCGT-GTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | |||||| |||||| |||||| | ||||||||||
Sbjct 196 ATCATCTTTTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260723898112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |