Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4682 75.2 3e-11 >seq4682 Length=338 Score = 75.2 bits (82), Expect = 3e-11 Identities = 128/184 (70%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || ||||||| | |||||| ||| | Sbjct 152 GGGACCAAGACAAGTCATCATGGCCTTAATAGCGTGGGCTATAGACGTGCCACATATACC 211 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT---TCTCAGT 412 ||||||||| || | | | | | ||| |||| |||||| ||| | | | Sbjct 212 TCTACAAAGGGATGCAATATTGTAAAATGGAGCTAATCTCATAAAATTGGATATAACTAT 271 Query 413 TCGG--ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||| ||||||||||| |||||||||| ||||| |||||| ||||||||||| ||| Sbjct 272 TCGTGAATTGTAGTCTGAAACTCGACTACATGAATATGGAATTACTAGTAATCGTGAATC 331 Query 471 AGCA 474 | || Sbjct 332 ACCA 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503909218560