Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5966 100 2e-19 seq5858 100 2e-19 seq5740 100 2e-19 seq5393 100 2e-19 seq5258 100 2e-19 seq5112 100 2e-19 seq5087 100 2e-19 seq4971 100 2e-19 seq4874 100 2e-19 seq4464 100 2e-19 seq4364 100 2e-19 seq5884 95.1 7e-18 seq5850 95.1 7e-18 seq5742 93.3 3e-17 seq5134 93.3 3e-17 seq3614 93.3 3e-17 seq5457 87.8 1e-15 seq5825 77.0 2e-12 seq5307 73.4 2e-11 seq5629 71.6 8e-11 >seq5966 Length=205 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 66 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 122 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 123 GGCAGGGACGTAAT-CAACGCAAGCT 147 >seq5858 Length=214 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 133 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 189 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 190 GGCAGGGACGTAAT-CAACGCAAGCT 214 >seq5740 Length=224 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 172 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 116 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 115 GGCAGGGACGTAAT-CAACGCAAGCT 91 >seq5393 Length=255 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 224 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 168 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 167 GGCAGGGACGTAAT-CAACGCAAGCT 143 >seq5258 Length=271 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 173 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 117 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 116 GGCAGGGACGTAAT-CAACGCAAGCT 92 >seq5112 Length=288 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 130 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 186 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 187 GGCAGGGACGTAAT-CAACGCAAGCT 211 >seq5087 Length=292 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 203 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 259 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 260 GGCAGGGACGTAAT-CAACGCAAGCT 284 >seq4971 Length=304 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 161 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 217 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 218 GGCAGGGACGTAAT-CAACGCAAGCT 242 >seq4874 Length=314 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 171 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 115 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 114 GGCAGGGACGTAAT-CAACGCAAGCT 90 >seq4464 Length=383 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||| ||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 135 CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 192 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 193 TAAT-CAACGCAAGCT 207 >seq4364 Length=407 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 93 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 149 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 150 GGCAGGGACGTAAT-CAACGCAAGCT 174 >seq5884 Length=211 Score = 95.1 bits (104), Expect = 7e-18 Identities = 77/87 (89%), Gaps = 5/87 (6%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGA-CGGGCGGGGTGTACAAA 97 |||| ||| |||||| ||||||| || ||||||||| |||| ||||||| ||||||||| Sbjct 99 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGAACGGGCGGTGTGTACAAA 43 Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||| ||||||||||| Sbjct 42 GGGCAGGGACGTAAT-CAACGCAAGCT 17 >seq5850 Length=212 Score = 95.1 bits (104), Expect = 7e-18 Identities = 77/87 (89%), Gaps = 5/87 (6%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG-TACAAA 97 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| ||| |||||| Sbjct 85 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGGTACAAA 141 Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||| ||||||||||| Sbjct 142 GGGCAGGGACGTAAT-CAACGCAAGCT 167 >seq5742 Length=222 Score = 93.3 bits (102), Expect = 3e-17 Identities = 76/86 (88%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| |||||||||| | ||||||||| Sbjct 158 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGTG-TGTACAAAG 103 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 102 GGCAGGGACGTAAT-CAACGCAAGCT 78 >seq5134 Length=285 Score = 93.3 bits (102), Expect = 3e-17 Identities = 75/86 (87%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||| |||| ||||||||| ||||||||||| |||||||||| Sbjct 162 TCCGGAAGC-CTCACTGAGCA--TTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 107 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 106 GGCAGGGACGTAAT-CAACGCAAGCT 82 >seq3614 Length=1072 Score = 93.3 bits (102), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 4/82 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 850 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 794 Query 99 GGCAGGGACGTAATACAACGCA 120 |||||||||||||| ||||||| Sbjct 793 GGCAGGGACGTAAT-CAACGCA 773 >seq5457 Length=248 Score = 87.8 bits (96), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 72 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 16 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 15 GGCAGGGACGTAAT 2 >seq5825 Length=216 Score = 77.0 bits (84), Expect = 2e-12 Identities = 51/54 (94%), Gaps = 2/54 (4%) Strand=Plus/Minus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCA 120 ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 215 TCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCA 164 >seq5307 Length=265 Score = 73.4 bits (80), Expect = 2e-11 Identities = 58/66 (88%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||| ||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 203 TCCGGAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 259 Query 99 GGCAGG 104 |||||| Sbjct 260 GGCAGG 265 >seq5629 Length=231 Score = 71.6 bits (78), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 3/65 (5%) Strand=Plus/Minus Query 47 TTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTG-TACAAAGGGCAGGG 105 |||||||| ||||||| || ||||||||| ||||||||||| ||| ||||||||||||| Sbjct 204 TTCTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGGTACAAAGGGCAGGC 147 Query 106 ACGTA 110 | ||| Sbjct 146 ATGTA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300782978480