Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq5326 141 1e-31 seq5061 141 1e-31 seq4984 141 1e-31 seq4873 141 1e-31 seq4278 141 1e-31 seq4125 141 1e-31 seq4932 138 1e-30 seq5245 136 5e-30 seq5519 134 2e-29 seq5272 134 2e-29 seq5765 120 4e-25 seq5450 109 7e-22 seq5556 102 1e-19 seq5297 102 1e-19 seq5215 91.5 2e-16 >seq5326 Length=260 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 7 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 66 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 67 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 126 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 127 CACCCAGTGAAGG 139 >seq5061 Length=296 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 249 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 190 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 189 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 130 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 129 CACCCAGTGAAGG 117 >seq4984 Length=302 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 81 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 140 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 141 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 200 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 201 CACCCAGTGAAGG 213 >seq4873 Length=313 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 149 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 90 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 89 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 30 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 29 CACCCAGTGAAGG 17 >seq4278 Length=439 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 183 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 242 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 243 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 302 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 303 CACCCAGTGAAGG 315 >seq4125 Length=507 Score = 141 bits (156), Expect = 1e-31 Identities = 112/133 (84%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 201 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 260 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 261 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 320 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 321 CACCCAGTGAAGG 333 >seq4932 Length=307 Score = 138 bits (152), Expect = 1e-30 Identities = 105/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 180 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 239 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||| |||| | | |||||||| ||| ||||||||||||||||| | || Sbjct 240 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 299 Query 126 CACC 129 |||| Sbjct 300 CACC 303 >seq5245 Length=274 Score = 136 bits (150), Expect = 5e-30 Identities = 102/116 (88%), Gaps = 3/116 (3%) Strand=Plus/Minus Query 39 TTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCT 98 ||||||||||||||||||||||||||| || | |||||||||||||||||||||||| | Sbjct 274 TTCTATTATTCCATGCTAATGTATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTT 215 Query 99 CAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCATACGGGCTCACCA 152 ||||||||||||||||||||| | |||| ||| |||| ||||| |||||| ||| Sbjct 214 CAAGGTAAAAGTCCTGGTTCCCCACCACACCCAGTGAAGGGCAT-GGGGCTCCCCA 160 >seq5519 Length=241 Score = 134 bits (148), Expect = 2e-29 Identities = 113/135 (84%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 60 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 119 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTT-TCTCA-AGGTAAAAGTCCTGGTTCCTCCG 123 || || |||| |||| | | |||||||| | || | ||||||||||||||||| | Sbjct 120 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTACAGACGTAAAAGTCCTGGTTCCCCGT 179 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 180 CACACCCAGTGAAGG 194 >seq5272 Length=270 Score = 134 bits (148), Expect = 2e-29 Identities = 102/119 (86%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 151 CGTC-CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGT 209 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 ||||| || || |||| |||| | | |||||||| ||| ||||||||||||||||| Sbjct 210 ATTCGAGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCC 268 >seq5765 Length=221 Score = 120 bits (132), Expect = 4e-25 Identities = 111/141 (79%), Gaps = 10/141 (7%) Strand=Plus/Plus Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG- 65 |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1 TAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGA 60 Query 66 --------GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT 117 || || |||| |||| | | |||||||| ||| ||||||||||||||| Sbjct 61 AAAAAAAAAGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTT 120 Query 118 CCTCCGCACA-CCAATGAAGG 137 || | |||| ||| |||||| Sbjct 121 CCCCGTCACACCCAGTGAAGG 141 >seq5450 Length=249 Score = 109 bits (120), Expect = 7e-22 Identities = 78/90 (87%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 151 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 210 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTT 95 || || |||| |||| | | |||||||| Sbjct 211 AGCATAGGCCTTCTTTAAGCGATCTAATTT 240 >seq5556 Length=238 Score = 102 bits (112), Expect = 1e-19 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 81 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 22 Query 66 GGCGTAAGCCTGCTTT 81 || || |||| |||| Sbjct 21 AGCATAGGCCTTCTTT 6 >seq5297 Length=266 Score = 102 bits (112), Expect = 1e-19 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 181 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 240 Query 66 GGCGTAAGCCTGCTTT 81 || || |||| |||| Sbjct 241 AGCATAGGCCTTCTTT 256 >seq5215 Length=276 Score = 91.5 bits (100), Expect = 2e-16 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 60 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595165196424