Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq5326 141 1e-31
seq5061 141 1e-31
seq4984 141 1e-31
seq4873 141 1e-31
seq4278 141 1e-31
seq4125 141 1e-31
seq4932 138 1e-30
seq5245 136 5e-30
seq5519 134 2e-29
seq5272 134 2e-29
seq5765 120 4e-25
seq5450 109 7e-22
seq5556 102 1e-19
seq5297 102 1e-19
seq5215 91.5 2e-16
>seq5326
Length=260
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 7 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 66
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 67 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 126
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 127 CACCCAGTGAAGG 139
>seq5061
Length=296
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 249 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 190
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 189 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 130
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 129 CACCCAGTGAAGG 117
>seq4984
Length=302
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 81 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 140
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 141 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 200
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 201 CACCCAGTGAAGG 213
>seq4873
Length=313
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 149 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 90
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 89 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 30
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 29 CACCCAGTGAAGG 17
>seq4278
Length=439
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 183 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 242
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 243 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 302
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 303 CACCCAGTGAAGG 315
>seq4125
Length=507
Score = 141 bits (156), Expect = 1e-31
Identities = 112/133 (84%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 201 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 260
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 261 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 320
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 321 CACCCAGTGAAGG 333
>seq4932
Length=307
Score = 138 bits (152), Expect = 1e-30
Identities = 105/124 (85%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 180 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 239
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||| |||| | | |||||||| ||| ||||||||||||||||| | ||
Sbjct 240 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCCCCGTCA 299
Query 126 CACC 129
||||
Sbjct 300 CACC 303
>seq5245
Length=274
Score = 136 bits (150), Expect = 5e-30
Identities = 102/116 (88%), Gaps = 3/116 (3%)
Strand=Plus/Minus
Query 39 TTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCT 98
||||||||||||||||||||||||||| || | |||||||||||||||||||||||| |
Sbjct 274 TTCTATTATTCCATGCTAATGTATTCGAGCAAAGGCCTGCTTTGAACACTCTAATTTTTT 215
Query 99 CAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCATACGGGCTCACCA 152
||||||||||||||||||||| | |||| ||| |||| ||||| |||||| |||
Sbjct 214 CAAGGTAAAAGTCCTGGTTCCCCACCACACCCAGTGAAGGGCAT-GGGGCTCCCCA 160
>seq5519
Length=241
Score = 134 bits (148), Expect = 2e-29
Identities = 113/135 (84%), Gaps = 3/135 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 60 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 119
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTT-TCTCA-AGGTAAAAGTCCTGGTTCCTCCG 123
|| || |||| |||| | | |||||||| | || | ||||||||||||||||| |
Sbjct 120 AGCATAGGCCTTCTTTAAGCGATCTAATTTGTTACAGACGTAAAAGTCCTGGTTCCCCGT 179
Query 124 CACA-CCAATGAAGG 137
|||| ||| ||||||
Sbjct 180 CACACCCAGTGAAGG 194
>seq5272
Length=270
Score = 134 bits (148), Expect = 2e-29
Identities = 102/119 (86%), Gaps = 1/119 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 151 CGTC-CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGT 209
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
||||| || || |||| |||| | | |||||||| ||| |||||||||||||||||
Sbjct 210 ATTCGAGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTTCC 268
>seq5765
Length=221
Score = 120 bits (132), Expect = 4e-25
Identities = 111/141 (79%), Gaps = 10/141 (7%)
Strand=Plus/Plus
Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG- 65
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1 TAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCGA 60
Query 66 --------GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT 117
|| || |||| |||| | | |||||||| ||| |||||||||||||||
Sbjct 61 AAAAAAAAAGCATAGGCCTTCTTTAAGCGATCTAATTTGTTCAGAGTAAAAGTCCTGGTT 120
Query 118 CCTCCGCACA-CCAATGAAGG 137
|| | |||| ||| ||||||
Sbjct 121 CCCCGTCACACCCAGTGAAGG 141
>seq5450
Length=249
Score = 109 bits (120), Expect = 7e-22
Identities = 78/90 (87%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 151 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 210
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTT 95
|| || |||| |||| | | ||||||||
Sbjct 211 AGCATAGGCCTTCTTTAAGCGATCTAATTT 240
>seq5556
Length=238
Score = 102 bits (112), Expect = 1e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 81 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 22
Query 66 GGCGTAAGCCTGCTTT 81
|| || |||| ||||
Sbjct 21 AGCATAGGCCTTCTTT 6
>seq5297
Length=266
Score = 102 bits (112), Expect = 1e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 181 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 240
Query 66 GGCGTAAGCCTGCTTT 81
|| || |||| ||||
Sbjct 241 AGCATAGGCCTTCTTT 256
>seq5215
Length=276
Score = 91.5 bits (100), Expect = 2e-16
Identities = 56/60 (93%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 60 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595165196424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |