Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq979 417 6e-112 seq1383 228 6e-55 >seq979 Length=11123 Score = 417 bits (462), Expect = 6e-112 Identities = 1237/1886 (66%), Gaps = 66/1886 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| || || | | || || |||| ||| | || ||||||||||| ||| Sbjct 5276 TCGACAGTGAATTGAATGGGCTGGGCGGCAGCCTGGGTGCGGAGGTAGTACATGCCCGTC 5217 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| ||| ||| | ||| ||||| | || | || |||| | ||||||| Sbjct 5216 TTGAGACCAAGCTTCCAGCCGGTGAAGTGCAT-GCTGGTGATCTTGCCCATGCTCGGCTC 5158 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || || || || | |||||| |||||||||| || |||||||| |||||||| Sbjct 5157 GCGCATGTGAATGTTGAGCGACTGGGACTGATCGATGAAAGCGCCACGATCGGCAGCCAT 5098 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | || || || || || ||||| ||||||||||| || | | | | || Sbjct 5097 CTGAACGACGGTGCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGA-GCCTTGATATCGG 5039 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 | || || | |||| ||||| ||||||| | || || ||||| || ||| Sbjct 5038 TCGGGATGTTAGGGATGTTCTGGATCGAACCACCATCGGCGATGATGCGGTTCTTCATGT 4979 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC---GATTGATGACTT 65432 || ||||| | ||||| |||| ||| | | |||| | | | |||| || | Sbjct 4978 TGTCGGACCAGAGACCCATGTCGACAAGGTCCTT---CAAGAGCCAGGGGTTGACAACCT 4922 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||| || | || |||||||| ||||||||||||||| ||| || ||| ||| Sbjct 4921 GGAACTCACCAGCCAAGACACGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCATT 4862 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| || ||||| | || || || || |||||||| |||| | ||| || Sbjct 4861 CGTTGTTGCCCAGGATTTGCGACGTCGAGGCGGTCGGCATGGGCGCGAGGAGCAAGCTGT 4802 Query 65553 TTCGCAATCCGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGT 65608 | || | || | | | || ||| ||| || ||||||||| ||| | || Sbjct 4801 TCCGGACACCATGCTCCTTGATCTTGGCCTTGA-GCG---CGTCCCAGTCCCAGA--GGC 4748 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG----CCGG 65664 ||| || | || |||||| || | || ||| | || |||| |||| Sbjct 4747 CGGTCGGCGTGA----CGTTCCACATGTCGTACTGGAGGATACC----CTGGGATACCGG 4696 Query 65665 TGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA---GCTGGTCTC 65721 || || | | ||| || | ||||||||| || | || | |||| Sbjct 4695 GGATCCTTCATAGGTCGAGTATGTGCCTTGCTCCTTGGCCAGATCGCACGAGGCGGTC-- 4638 Query 65722 GAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCT 65781 || || || ||| ||||||||||| || | ||| || ||||| ||||| Sbjct 4637 -AGAGCCGCGTGATAGATGGTCTCGAAGATTTGCTTATTCAGCTCACGAGCCTCGGGAGA 4579 Query 65782 CTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841 |||| | ||||| | | | | |||| |||||||| || || || || | ||||| Sbjct 4578 CTCGAAAGGCATGCGAAGCGCCAGGAAAGCATCGGCCAGGCCCTGGACACCGACGCCGAT 4519 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 ||| || || |||| ||| ||||| | || ||||||| |||| ||||| Sbjct 4518 GGGGCGGTGGCGCATGTTGCTGTTGTAAGCCTCCTGGACCGGGTAGTGGTTGACGTCGAT 4459 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAA 65960 || |||| ||||| ||| || || ||| | ||| ||| | | ||| ||| Sbjct 4458 GATCTTGTTCAGGTTGCGAACCACGACTTGGGCGACTTCGT-GCAGCTTCTGGAAGTCAT 4400 Query 65961 AATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGA 66020 | ||| | || | | | || |||| |||||||| || || || | Sbjct 4399 A--------GACACCCT----TGTTGTAGTCGACGAACTGAGGAAGGGCCAGCGAGGCCA 4352 Query 66021 GGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTAC 66080 |||||||||| || | |||||| || || | ||||||| || || |||||||| || Sbjct 4351 GGTTGCAGACGGCAACCTCGTCGGGTGCCGAGTACTCGATGATCTCAGTGCACAGGTTGG 4292 Query 66081 TGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACA 66140 || ||| |||||||| | |||| || || |||||||| ||||| ||||||||| | Sbjct 4291 AGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 4232 Query 66141 TCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTG 66200 |||| | || |||||||||| || | ||| | |||||| | ||| || | | Sbjct 4231 GCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCAGAGCTTTTGGG 4172 Query 66201 CCTTCACCGT---ACGTACCGC--CCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 |||| | || ||| ||||| || |||| ||||| | || || ||| || Sbjct 4171 CCTTGATAGTCTTACG-ACCGCGGCCGGCCTTC----TCGTACTTCTCATACAGGGCCTC 4117 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 ||| ||||| | |||| || | || |||| || || |||||||| | ||| Sbjct 4116 GAACTCGTCACCATAGCAATCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCA 4057 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || || | || || ||||| ||| || || || || ||||||||||| |||||| Sbjct 4056 CTCTCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAAGAG 3997 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 |||||| || || ||||| ||||||| || || || | ||||||||||||||||| Sbjct 3996 ATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCGAGGAACTCAAAGAC 3937 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 |||||| ||||| || || ||||||||||| || | || ||| ||| ||||||||| Sbjct 3936 GTCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCGGGACGCTTGTTGCCACCTTG 3877 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 ||| |||||||| ||| |||||||||||||| | ||| || | || || || || | Sbjct 3876 GTCAACGTAGCGGGCGGTGTTGTTGAAGACACGGAGCATGGGGATGATGCCATTGGAAGT 3817 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 ||| ||||||||| ||||| ||||| || || || ||| | || || || || Sbjct 3816 GCCGTTGGTGCCGGCGATGTATGATCCAGTCGCACGGATGCGGTGGATGTTGAGGCCGAT 3757 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCA 66673 || || ||| |||| || || || ||| || |||||| | | ||||| || Sbjct 3756 GCCGCCTGCCATCTTGGAAATCATGGCGCAAGTCTTAAGACTGTC--GTAGATGCCCTCG 3699 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCG 66733 ||| |||| |||| ||| | ||| |||| || ||| |||| | || || || Sbjct 3698 ATGCTGTCATCCTTCATGTCGACCAGGAAGCAAGAGGAAAGCTGGGCCTGAGGGGTACCG 3639 Query 66734 GCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTC 66793 || |||||||||||| | || || || ||| | | | |||||| ||||| ||| Sbjct 3638 GCGTTGAAGAGGGTGGGGGAGGCATGTGTGAAGAACTTGTTGGACATGAGGTTGTATGTC 3579 Query 66794 TCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTAT 66853 |||||||| || | ||| || || || |||| ||| ||||| | | || Sbjct 3578 TCGATGACGCGCTCCACGTTGTCTCCCCAGATGCCGACGGCAACACGCATGATCATGTGC 3519 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 || || || ||||| | | | |||| | || | ||| ||||| |||||||||||| Sbjct 3518 TGTGGGCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTATGAGCGCTCCAGGGTCTTG 3459 Query 66914 ATACCAAAGTACGAGTAATTGAAATC 66939 | ||||||||| ||| ||||| || Sbjct 3458 AAGCCAAAGTACTGGTAGTTGAAGTC 3433 >seq1383 Length=8527 Score = 228 bits (252), Expect = 6e-55 Identities = 569/852 (67%), Gaps = 14/852 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | |||||| | || | Sbjct 6913 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGACCTC 6972 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | | | | ||| || ||| | | ||||| Sbjct 6973 TCCAAGGACCTCCACGACTGGAACAACAAGATCAACGA-CGATGAGAAGTACTTCATCTC 7031 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| ||||| |||||||| |||||||| ||||| | | || || Sbjct 7032 TCACATCCTCGCTTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 7091 Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || | ||||| || || ||||||| || || ||||||||||||||||| | Sbjct 7092 CTTCA-GCGGCGAGGTCCAGGTCCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGA 7150 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| ||||||| |||| ||| | ||||| || || ||||||| ||||| | Sbjct 7151 TGGAGAACATCCACTCTGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCTG 7210 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || | |||||||||||||||| || || || || | ||| || | Sbjct 7211 CCCAGCGCACGCACCTGTTCAATGCCATCGACACCATCCCCGCCATCCGCAAGAAGGCCG 7270 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACA-ACGGCTACATTTGGTGAACGATTGCTGGCA 61500 | |||||| | ||||||| | | || | | | || |||| | || || | || Sbjct 7271 ACTGGGCCCTGCGGTGGATCA-CTGACCAGAAGTCGACCTTTGCCCAGCGCCTGGTCGCG 7329 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 ||||| | ||||||||| | || ||||| || | |||||| | ||||| ||| | ||| Sbjct 7330 TTTGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAG 7389 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || || |||||||| ||||||||| ||| ||| | || || || |||||||| Sbjct 7390 AAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGT 7449 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680 | || || || || |||| ||| ||| | || || || || || Sbjct 7450 CTCCACACCGACTTCGCCTGCCTGCTGTTC--TCGC-ACCTTAACAACCGCCCCAGCAAG 7506 Query 61681 GAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGA 61739 || | | || | | |||| || || || ||||| ||||| || || || || Sbjct 7507 CAGGTCATTGAGGACA-TCATCGTCGACGCCGTGCGCATCGAGCAGGAGTTCCTCACCGA 7565 Query 61740 CGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATT 61799 || |||| | | || |||||||||| | || ||| |||||| ||||| || Sbjct 7566 GGCCCTGCCGTGCGCCCTGCTCGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTT 7625 Query 61800 TGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCC 61859 || |||||||| ||| | |||| | || | || | | || ||| |||||| Sbjct 7626 CGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGAGAAGGTGTACCGGTCGACAAACCC 7685 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 || || |||||||| | || || || | |||||||| || || |||||||| || || Sbjct 7686 CTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGCGT 7745 Query 61920 AGGCGACTATCA 61931 ||||| || || Sbjct 7746 CGGCGAGTACCA 7757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397538753407040