Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05]
6,036 sequences; 34,745,808 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq270 102 3e-16
seq1557 84.2 9e-11
>seq270
Length=23592
Score = 102 bits (112), Expect = 3e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 448666 CTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCTGCCGCGT 448725
|||||| || |||| || |||||||||| |||| || ||||||||||||||||||||
Sbjct 664 CTCCATTTCTCCCAGCCGCAGCCCGCCGTCTCGCGACCGACCCTCGGTGGGCTGCCGCGT 723
Query 448726 GAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTTGCTTGAG 448785
||||| || || || | | ||||| ||||||||| ||| ||| ||||| ||
Sbjct 724 GAGGATCGCCCGGGGCCCGCGCGACCGCGAGTGCATCTTGTCCTGCACCATGTGCTTCAG 783
Query 448786 GCTCTGGAAGAAGAAGGGCGCGTAGAACA 448814
|| |||| || ||| ||| ||| |||||
Sbjct 784 GCGCTGGTAGTAGATTGGCCCGTTGAACA 812
>seq1557
Length=7509
Score = 84.2 bits (92), Expect = 9e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 448974 TGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGT 449033
||| | |||| ||||| ||| |||| |||||| |||||||| ||| |||||||
Sbjct 3418 TGGACAGGAGACACTCGATCAAATGGGCGATGGTCATACGCGACGGAATGGCGTGCGGGT 3359
Query 449034 TCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTC 449082
| ||||||||||||||||| ||| |||| |||| |||||||||||
Sbjct 3358 TGATGATGATGTCGGGCGTGATGCCCTCCGCCGTGAACGGCATGTCCTC 3310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084574041748728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |