Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetomium_20cochliodes_20[genbank_20GCA_5F001752565.1_202016-10-05] 6,036 sequences; 34,745,808 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq270 102 3e-16 seq1557 84.2 9e-11 >seq270 Length=23592 Score = 102 bits (112), Expect = 3e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 448666 CTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCTGCCGCGT 448725 |||||| || |||| || |||||||||| |||| || |||||||||||||||||||| Sbjct 664 CTCCATTTCTCCCAGCCGCAGCCCGCCGTCTCGCGACCGACCCTCGGTGGGCTGCCGCGT 723 Query 448726 GAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTTGCTTGAG 448785 ||||| || || || | | ||||| ||||||||| ||| ||| ||||| || Sbjct 724 GAGGATCGCCCGGGGCCCGCGCGACCGCGAGTGCATCTTGTCCTGCACCATGTGCTTCAG 783 Query 448786 GCTCTGGAAGAAGAAGGGCGCGTAGAACA 448814 || |||| || ||| ||| ||| ||||| Sbjct 784 GCGCTGGTAGTAGATTGGCCCGTTGAACA 812 >seq1557 Length=7509 Score = 84.2 bits (92), Expect = 9e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 448974 TGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGT 449033 ||| | |||| ||||| ||| |||| |||||| |||||||| ||| ||||||| Sbjct 3418 TGGACAGGAGACACTCGATCAAATGGGCGATGGTCATACGCGACGGAATGGCGTGCGGGT 3359 Query 449034 TCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTC 449082 | ||||||||||||||||| ||| |||| |||| ||||||||||| Sbjct 3358 TGATGATGATGTCGGGCGTGATGCCCTCCGCCGTGAACGGCATGTCCTC 3310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084574041748728