Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 302 4e-77 seq4 237 1e-57 >seq8 Length=1110981 Score = 302 bits (334), Expect = 4e-77 Identities = 639/951 (67%), Gaps = 8/951 (1%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| ||| ||||||||||| || |||||||| ||||| | ||| || || || Sbjct 324365 ACAAATGAGGGCAGGGCAAGAGAGGCCAGGTTGCACACAGCAACCTCATCGGGGGCACAG 324424 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||||| ||| || |||||||| || || ||| ||||| |||| |||| || || Sbjct 324425 TACTCGATAATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTG 324484 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 |||||||| ||||| |||||||| | ||| | ||| |||| ||||| |||| | Sbjct 324485 CTCTTGCGGTTGCAGCTGTCCTTGTAAAGCATAAAGGGATTGCCAGTCTCGGTCTGGGCC 324544 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA---CCGTACGTAC-CGCCCTACCTTT 66228 || | ||||||| ||| || | || || | || | || | || ||| ||||| Sbjct 324545 TCCAGAATGGCGTACCACAGCTTCTGAGCTTTGATAACCATGCGGCCACGGCCTTCCTTT 324604 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 ||||| | |||||| || ||| || || || | || | ||| | || Sbjct 324605 ----TCGTACTTTTCGTACAGAGCTTCAAACTCATCGCCGTAGCAGTCAGCCAGGCCGGG 324660 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 |||| || || |||||||| | ||| || | | || || ||||| ||| || || Sbjct 324661 GCACTCGTTGGGGCACATCAGAGTCCAGTCCTCGTTCTTCTCAACACGCTTCATGAACAG 324720 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 || ||||| || || ||| | ||||| || || ||| || | || || || Sbjct 324721 GTCGCAGATCCACAGAGCCAGGAACAAGTCGCGGGCACGAACCTCTTCCTTTCCATGGTT 324780 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||||| ||| ||||||||||| | |||||| ||||| ||||||||||| || || || Sbjct 324781 CTTGCGCAGGTCAAGGAACTCAAACACGTCGGCGTGCCAGGGTTCCAGGTATATAGCAAA 324840 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 | || || ||| |||||| ||||| || ||||| || |||||||||||||| Sbjct 324841 GGCACCGGGCCGCTTGTTGCCACCCTGGTCAACATAGCGGGCCGTGTTGTTGAAGACACG 324900 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 |||||| || || | ||||| || | || ||||||||| | ||| ||| || || Sbjct 324901 CAACATAGGAACAATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCAGTGGC 324960 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || ||| || || ||||| || || || ||| |||| ||||| ||||||| Sbjct 324961 ACGAATGCGGTGGACGTTGAGACCGATGCCGCCAGCCATCTTGGAGATCATAGCACAAGT 325020 Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGA 66708 | || | | ||||| |||||| ||| |||| ||| | || ||||||| Sbjct 325021 CTTGAGGGTATCGTAAATGCCCTCAATGCTGTCGTCCTTCATGTCGACTAGAAAGCATGA 325080 Query 66709 ACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA 66768 | || |||| | || || |||| |||||| ||||| | || || |||||| | Sbjct 325081 AGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAGAGAGTGGGAGACGCATGGGTAAAGAA 325140 Query 66769 ATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 | || |||||| ||||| ||||||| ||| || | || || || ||| || Sbjct 325141 CTTGCTCGACATGAGGTTGTAAGTCTCGAGAACACGCTCCACATTGTCACCCCAAATGCC 325200 Query 66829 GAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCAT 66888 || ||| ||||| | | || || || || ||||| | | | | || | | Sbjct 325201 GACGGCAACACGCATAATCATGTGCTGGGGACGCTCGACAATCTTGCCGTCGAGCTTAAG 325260 Query 66889 TAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||||||||| ||||||||||||| ||||||||| ||| ||||| || Sbjct 325261 CAGGTAGGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 325311 >seq4 Length=2525909 Score = 237 bits (262), Expect = 1e-57 Identities = 575/855 (67%), Gaps = 18/855 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | ||||| | || || Sbjct 2286485 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCCTTCTGGACTGCCGAGGAAATTGACCTG 2286544 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | || | | | || | |||||| | ||||| Sbjct 2286545 TCCAAGGACCTTCACGACTGGAACAACCGCCTGAACAAG-GATGAACAGTACTTCATCTC 2286603 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | | || ||||| ||||| || ||||| |||||||| ||||| | | || || Sbjct 2286604 GCACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAACGAGAACCTCGTCGAGCG 2286663 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | ||||| || | | ||||| || || ||||||||||||||||| || Sbjct 2286664 TTTCTCCGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 2286723 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| |||| | || ||||| || ||||||| ||||| | Sbjct 2286724 GGAGAACATCCACTCCGAGACGTACTCGCTGCTGATCGACACTTACATCAAGGAGCCCTC 2286783 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || | | | | ||||| |||||||| || || ||| | || || || | Sbjct 2286784 GCAGCG-CACCTACCTCTTCAACGCCATCGATACCATCCCGTGCATCCGCCGCAAGGCCG 2286842 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 | |||||| |||| ||||||||| |||| | | || |||| | || || | || Sbjct 2286843 ACTGGGCCCTCAAGTGGATCACC--GACAAGGAGTCGACCTTTGCCCAGCGCCTGGTCGC 2286900 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | |||||||| | || ||| || | || ||| | ||||| ||| || Sbjct 2286901 CTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCGCTTTCGCCTCCATCTTCTGGCTGCG 2286960 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 || || || || ||||| || ||||||||| ||| ||| |||| || || |||||||| Sbjct 2286961 CAAGCGCGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGGG 2287020 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA 61679 | |||| || ||||| | |||| ||| ||| | || || || || | Sbjct 2287021 CCTGCACACCGACTTTGCCTGTCTGCTGTTC--TCGC-ACCTCAACAACCGCCCCAGCAA 2287077 Query 61680 GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGA 61739 | ||| || | |||| | || || || || || |||| || ||||| || Sbjct 2287078 GCAGCTAGTCGAGCAGATCATCACCGATGCTGTCGTCATTGAGAAGGAGTTCCTGACCGA 2287137 Query 61740 CGCTTTGCCC-GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAAT 61798 || ||||| || | ||| |||||||||| | || ||| |||||| ||||| | Sbjct 2287138 GGCCCTGCCCTGTGGC-CTCCTCGGCATGAACGCCGACCTCATGAAGCAGTACATTGAGT 2287196 Query 61799 TTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 | || |||||||| ||| | |||| | || | ||| || |||| | | ||| Sbjct 2287197 TCGTCGCCGACCGCCTGCTCGTCGCCCTCGGAAACGAAAAGG-TCTACCGCGCCACCAAC 2287255 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || ||||| || ||||| | || ||||| | |||||||| || || |||||||| || Sbjct 2287256 CCCTTTGACTTTATGGAGAACATCTCGCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGC 2287315 Query 61918 GTAGGCGACTATCAA 61932 || |||||||| ||| Sbjct 2287316 GTGGGCGACTACCAA 2287330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567941855680