Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chalaropsis_20thielavioides_20[genbank_20GCA_5F001599435.1_202016- 03-01] 12 sequences; 23,333,049 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2 120 1e-21 >seq2 Length=3936381 Score = 120 bits (132), Expect = 1e-21 Identities = 118/147 (80%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | | ||||||||||||||||| ||| ||||| | Sbjct 3220393 CAATGGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATGCCCT 3220452 Query 364485 CAGCG-GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 | ||| ||||| ||||| ||||| || || ||| | | |||||| || |||||||| | Sbjct 3220453 C-GCGCGTAAACGGCATGTCTTCTTGACGGTACG-TCACACCAATCGTACCCTTTTGACC 3220510 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||||||||| Sbjct 3220511 GTGACGAGACGCAAACTTGTCGCCAAT 3220537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884886110198716