Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6218 100 2e-19 seq3187 100 2e-19 seq718 95.1 7e-18 >seq6218 Length=9160 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| | ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 7272 TCCGAAAGC-CTCACTGAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7216 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 7215 GGCAGGGACGTAAT-CAACGCAAGCT 7191 >seq3187 Length=16417 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| | ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 16264 TCCGAAAGC-CTCACTGAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 16208 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||||||||||| Sbjct 16207 GGCAGGGACGTAAT-CAACGCAAGCT 16183 >seq718 Length=1307 Score = 95.1 bits (104), Expect = 7e-18 Identities = 74/83 (89%), Gaps = 4/83 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| | ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 1296 TCCGAAAGC-CTCACTGAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1240 Query 99 GGCAGGGACGTAATACAACGCAA 121 |||||||||||||| |||||||| Sbjct 1239 GGCAGGGACGTAAT-CAACGCAA 1218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300781909700