Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5962 352 8e-95 >seq5962 Length=301 Score = 352 bits (390), Expect = 8e-95 Identities = 259/299 (87%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 299 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAACGATGCGTAGCCGACCTGAGAGG 240 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 239 ATGATCGGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGG 180 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || | |||||||| ||||||||| | ||||| |||||||||| || |||||||||| Sbjct 179 AATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAGTGAAGAAGGCCTTC 120 Query 348 GGGTCGTAAAGCTC-TGTCCTCAAGGAAGAT--AATGACGGTACTTGAGGAGGAAGCCCC 404 |||| |||||| || | || || |||||| |||||||||| || ||| ||| | | Sbjct 119 GGGTTGTAAAGTTCTTTTCATCGGAGAAGATACAATGACGGTATCTGTGGAATAAGTCTC 60 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 |||||||| ||||||||||||||||||||||| |||| || |||||| | |||||||| Sbjct 59 GGCTAACTCTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497503928960