Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq6218 461 1e-127 seq3187 77.0 6e-12 >seq6218 Length=9160 Score = 461 bits (510), Expect = 1e-127 Identities = 288/309 (93%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||||| ||||| ||| |||||||||| Sbjct 6916 GAACGAGACCTTAACCTGCTAAATAGCCCGCGCCGCTCAGGCGGCACGCTGGCTTCTTAG 6975 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6976 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7035 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct 7036 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTC--CTCCTTGGCCG 7093 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 7094 GAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 7153 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 7154 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 7213 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 7214 CCCTTTGTA 7222 >seq3187 Length=16417 Score = 77.0 bits (84), Expect = 6e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 16163 CCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 16214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947139237120