Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6218 253 3e-65 >seq6218 Length=9160 Score = 253 bits (280), Expect = 3e-65 Identities = 230/283 (81%), Gaps = 15/283 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 1744 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 1801 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1802 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1861 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | ||||| || | | |||| |||||| ||||||||||||||| || | Sbjct 1862 GAACGCGATGA-TATCTCCCGCTCGTTGTAGACGGATAAGAATAGGCTTCGGCCTCGCAT 1920 Query 181 CTTAGCAGGC-----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235 | |||||||| | || ||||| || |||| || || | | | | ||| | Sbjct 1921 CCTAGCAGGCGATCTCTCCACCGGGC-TC-----GAAGTGCACGGTGGT-AATTCGCGTA 1973 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||||| | || |||| || ||||||||||||||||||| Sbjct 1974 TTGTAATTTAAGCACGCGCGGGATTAAATCCTTTGCAGACGAC 2016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819149090560