Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6218 722 0.0 seq2 158 4e-36 >seq6218 Length=9160 Score = 722 bits (800), Expect = 0.0 Identities = 464/504 (92%), Gaps = 2/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5696 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 5637 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5636 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 5577 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| || | |||||| | ||||||||||||| |||| || Sbjct 5576 TCTCAGGCTCCTTCTCCGGGGTCAAGCCCTAACCCTCCGTTACCCGTTGTAACCACGGCT 5517 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 5516 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 5457 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct 5456 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 5397 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||||| Sbjct 5396 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTAAGCATGTATTAGCTCTAG 5337 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 5336 AATTACCACGGTTATCCATGTAGT-AGGTACTATCAAATATACGATAACTGATTTAATGA 5278 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| | || ||| |||||| |||||||| |||||||||||||||||| Sbjct 5277 GCCATTCGCAGTTTCGCCGTTTAG-GTGCTTAAACTTAGACTTGCATGGCTTAATCTTTG 5219 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 5218 AGACAAGCATATGACTACTGGCAG 5195 >seq2 Length=102259 Score = 158 bits (174), Expect = 4e-36 Identities = 108/122 (89%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 173 CCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAT 232 ||| || ||||| | || || |||||||||||||||||||||||||||||||||||| Sbjct 102138 CCACGGCTGGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAT 102197 Query 233 CGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGG 292 ||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 102198 CGCCGGCACAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGTGAGCCCCGAAGG 102257 Query 293 GC 294 || Sbjct 102258 GC 102259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510303107840