Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq475 484 1e-134 seq743 212 1e-52 >seq475 Length=8680 Score = 484 bits (536), Expect = 1e-134 Identities = 298/315 (95%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct 3497 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3438 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3437 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 3378 Query 125 TAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3377 TAGCATGGAATAATAGAATAGGACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 3318 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct 3317 TAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTCTTG 3258 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct 3257 GATCGATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-G 3199 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 3198 AACGAAAGTTAGGGG 3184 >seq743 Length=1130 Score = 212 bits (234), Expect = 1e-52 Identities = 163/191 (85%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 121 ACATTAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACC 179 ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| Sbjct 947 ACATTAGCATGGAATAATAGAATGGAACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACC 1006 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||||| || |||||| |||||| |||||||||||||| | Sbjct 1007 GCCGTAATGATTAATAGGGACAGCCGGGGGCATCAGTA------TGTCAGAGGTGAAACT 1060 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||| ||||||||||| || | |||||| || | ||| ||||||||||||||| Sbjct 1061 TTTGGATCGATTGAAGACTAGTTATTTCGAAAGAATTTGCTAAGAATGTTTTCATTAATC 1120 Query 300 AGTGAACGAAA 310 || |||||||| Sbjct 1121 AG-GAACGAAA 1130 Score = 95.1 bits (104), Expect = 2e-17 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 ||||||||||||||| ||||| || |||||||||||||||| ||| |||||| ||||||| Sbjct 717 CCGGGCCTTTCCTTCCGGGGAGCCACATGCCCTTCACTGGGAGTGTCGGGGAACCAGGAC 776 Query 73 TTTTACT 79 ||||||| Sbjct 777 TTTTACT 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191268992