Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq475 484 1e-134
seq743 212 1e-52
>seq475
Length=8680
Score = 484 bits (536), Expect = 1e-134
Identities = 298/315 (95%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 3497 TGGTCCGGCCGGGCCTTTCCCTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3438
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3437 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 3378
Query 125 TAGCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3377 TAGCATGGAATAATAGAATAGGACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 3318
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct 3317 TAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATCGTCAGAGGTGAAATTCTTG 3258
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 3257 GATCGATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-G 3199
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 3198 AACGAAAGTTAGGGG 3184
>seq743
Length=1130
Score = 212 bits (234), Expect = 1e-52
Identities = 163/191 (85%), Gaps = 8/191 (4%)
Strand=Plus/Plus
Query 121 ACATTAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACC 179
||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||
Sbjct 947 ACATTAGCATGGAATAATAGAATGGAACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACC 1006
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
|||||||||||||||||||| || |||||| |||||| |||||||||||||| |
Sbjct 1007 GCCGTAATGATTAATAGGGACAGCCGGGGGCATCAGTA------TGTCAGAGGTGAAACT 1060
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
|||||| ||||||||||| || | |||||| || | ||| |||||||||||||||
Sbjct 1061 TTTGGATCGATTGAAGACTAGTTATTTCGAAAGAATTTGCTAAGAATGTTTTCATTAATC 1120
Query 300 AGTGAACGAAA 310
|| ||||||||
Sbjct 1121 AG-GAACGAAA 1130
Score = 95.1 bits (104), Expect = 2e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
||||||||||||||| ||||| || |||||||||||||||| ||| |||||| |||||||
Sbjct 717 CCGGGCCTTTCCTTCCGGGGAGCCACATGCCCTTCACTGGGAGTGTCGGGGAACCAGGAC 776
Query 73 TTTTACT 79
|||||||
Sbjct 777 TTTTACT 783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915191268992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |