Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq475 650 0.0 >seq475 Length=8680 Score = 650 bits (720), Expect = 0.0 Identities = 553/671 (82%), Gaps = 13/671 (2%) Strand=Plus/Minus Query 18 AGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAG 76 |||| ||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct 1610 AGCCTGTGTGAAACTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGGGAG 1551 Query 77 GTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 136 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1550 GTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATC 1491 Query 137 GAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||||||||||||| ||| |||| | |||||| || |||||||||||||||||||||| Sbjct 1490 GAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAA 1431 Query 197 GCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTT 255 ||||||| ||||||||||| | | ||||| || || ||| ||||||||||| Sbjct 1430 GCGCTTGTGACCAGACTTGCGCCGGGCGGCTCATCCGGGGTTCTC-CCCGGTGCACTCCG 1372 Query 256 CTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCC-C 314 | | ||||||||||||| | || | | |||||| | | |||| ||||||| | Sbjct 1371 CCCGGCTCAGGCCAGCATCGGTTCTCGTTGGGGGATAAGAACGGCAGGAACGTGGCCCTC 1312 Query 315 CTTCGGG-GGGTGTTATAGCCCGGGGTGGAATGCGGCCCG-CCTGGACTGAGGTCCGCGC 372 ||||||| ||||||||||||| | || || | || | | |||| ||||| ||||| Sbjct 1311 CTTCGGGTGGGTGTTATAGCCTGCCGTACGATAC--CCTGACGGGGACCGAGGTTCGCGC 1254 Query 373 TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGA 432 ||| || ||||||||||||||||||| | |||| ||||||||| ||||||||||||||| Sbjct 1253 TCC-GCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAGGA 1195 Query 433 GTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGA 492 ||| ||| ||||| |||||||||||||||||| ||||||||||||||||| | Sbjct 1194 GTCGTCCATTAGAGCGAGCGTTTGGGTGTCAAACCCGCACGCGTAATGAAAGTGAAATTA 1135 Query 493 GGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552 |||| || | || ||| ||||||||||||||||||| |||||||||||||||| Sbjct 1134 GGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGT 1079 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||| | | |||||||||||| ||||||||||| || ||||||||||||||| Sbjct 1078 AAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACTATGCTTGTATAGGGTGAAGCCAG 1019 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | Sbjct 1018 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGAG 959 Query 673 TATAGGGGCGA 683 || ||||||| Sbjct 958 CATGGGGGCGA 948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079979536700