Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq475 253 3e-65
seq866 145 1e-32
seq109 127 3e-27
>seq475
Length=8680
Score = 253 bits (280), Expect = 3e-65
Identities = 230/283 (81%), Gaps = 15/283 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 7541 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 7484
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 7483 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 7424
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | ||||| || | | |||| |||||| ||||||||||||||| || |
Sbjct 7423 GAACGCGATGA-TATCTCCCGCTCGTTGTAGACGGATAAGAATAGGCTTCGGCCTCGCAT 7365
Query 181 CTTAGCAGGC-----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235
| |||||||| | || ||||| || |||| || || | | | | ||| |
Sbjct 7364 CCTAGCAGGCGATCTCTCCACCGGGC-TC-----GAAGTGCACGGTGGT-AATTCGCGTA 7312
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||||| | || |||| || |||||||||||||||||||
Sbjct 7311 TTGTAATTTAAGCACGCGCGGGATTAAATCCTTTGCAGACGAC 7269
>seq866
Length=617
Score = 145 bits (160), Expect = 1e-32
Identities = 99/109 (91%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 568 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 511
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 510 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAG 462
Score = 98.7 bits (108), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 16/196 (8%)
Strand=Plus/Minus
Query 98 CCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCG 154
||||||||||||||||||||| |||||| ||||| |||| | || |||| ||| |
Sbjct 238 CCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATG 179
Query 155 GATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTC 204
||||||||| |||| | || | | ||||| |||||||| ||||||| ||
Sbjct 178 GATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACT 119
Query 205 CCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAA 262
|||||| || ||| ||| ||||||| |||||||| ||| |||| |||||||
Sbjct 118 TGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAA 60
Query 263 ATCCTTTGCAGACGAC 278
||| |||| | |||||
Sbjct 59 ATCATTTGTATACGAC 44
>seq109
Length=123115
Score = 127 bits (140), Expect = 3e-27
Identities = 76/80 (95%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 46 GTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105
||| |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1 GTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAG 60
Query 106 TCAGAATCCATGCCAGAACG 125
||||||||||||||||||||
Sbjct 61 TCAGAATCCATGCCAGAACG 80
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192429056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |