Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq475 253 3e-65 seq866 145 1e-32 seq109 127 3e-27 >seq475 Length=8680 Score = 253 bits (280), Expect = 3e-65 Identities = 230/283 (81%), Gaps = 15/283 (5%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 7541 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 7484 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7483 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 7424 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | ||| | ||||| || | | |||| |||||| ||||||||||||||| || | Sbjct 7423 GAACGCGATGA-TATCTCCCGCTCGTTGTAGACGGATAAGAATAGGCTTCGGCCTCGCAT 7365 Query 181 CTTAGCAGGC-----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235 | |||||||| | || ||||| || |||| || || | | | | ||| | Sbjct 7364 CCTAGCAGGCGATCTCTCCACCGGGC-TC-----GAAGTGCACGGTGGT-AATTCGCGTA 7312 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||||| | || |||| || ||||||||||||||||||| Sbjct 7311 TTGTAATTTAAGCACGCGCGGGATTAAATCCTTTGCAGACGAC 7269 >seq866 Length=617 Score = 145 bits (160), Expect = 1e-32 Identities = 99/109 (91%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 568 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 511 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 510 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAG 462 Score = 98.7 bits (108), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 16/196 (8%) Strand=Plus/Minus Query 98 CCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCG 154 ||||||||||||||||||||| |||||| ||||| |||| | || |||| ||| | Sbjct 238 CCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATG 179 Query 155 GATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTC 204 ||||||||| |||| | || | | ||||| |||||||| ||||||| || Sbjct 178 GATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACT 119 Query 205 CCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAA 262 |||||| || ||| ||| ||||||| |||||||| ||| |||| ||||||| Sbjct 118 TGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAA 60 Query 263 ATCCTTTGCAGACGAC 278 ||| |||| | ||||| Sbjct 59 ATCATTTGTATACGAC 44 >seq109 Length=123115 Score = 127 bits (140), Expect = 3e-27 Identities = 76/80 (95%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 46 GTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 ||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1 GTCCGACCGGGCAGTGCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAG 60 Query 106 TCAGAATCCATGCCAGAACG 125 |||||||||||||||||||| Sbjct 61 TCAGAATCCATGCCAGAACG 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819192429056