Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20deuterocubensis_20[genbank_20GCA_5F001513825.1_202016
-01-13] 2,574 sequences; 43,968,379 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq377 253 3e-65
>seq377
Length=9429
Score = 253 bits (280), Expect = 3e-65
Identities = 230/283 (81%), Gaps = 15/283 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 5709 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 5652
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5651 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5592
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | ||||| || | | |||| |||||| ||||||||||||||| || |
Sbjct 5591 GAACGCGATGA-TATCTCCCGCTCGTTGTAGACGGATAAGAATAGGCTTCGGCCTCGCAT 5533
Query 181 CTTAGCAGGC-----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGA 235
| |||||||| | || ||||| || |||| || || | | | | ||| |
Sbjct 5532 CCTAGCAGGCGATCTCTCCACCGGGC-TC-----GAAGTGCACGGTGGT-AATTCGCGTA 5480
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||||| | || |||| || |||||||||||||||||||
Sbjct 5479 TTGTAATTTAAGCACGCGCGGGATTAAATCCTTTGCAGACGAC 5437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819179572736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |