Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1046 136 5e-30 >seq1046 Length=23093 Score = 136 bits (150), Expect = 5e-30 Identities = 185/254 (73%), Gaps = 7/254 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 3302 CTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAG 3244 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| || | ||| | ||| ||| | |||| Sbjct 3243 AGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCTCATTGGGCTCC 3184 Query 121 A--CACGTCG---TTCACCAGC-AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 | | || | |||||| | | ||||| |||||| |||||||||||| | || ||| Sbjct 3183 ATCCGCGAGGGACTTCACCTACTAAAGGCACACCTTCTTCCGAAGTTACGGTGTCAATTT 3124 Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234 ||||| |||||| || ||||| | | | |||||||| || ||| | | |||| || Sbjct 3123 GCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCGCACCAGT 3064 Query 235 GTCGGTTTACGGTA 248 |||||||| ||||| Sbjct 3063 GTCGGTTTGCGGTA 3050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694381675652