Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1046 316 7e-84 seq2085 100 1e-18 >seq1046 Length=23093 Score = 316 bits (350), Expect = 7e-84 Identities = 406/550 (74%), Gaps = 21/550 (4%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110 ||| |||||||||||| | || |||||| | | |||||||| | | |||||| Sbjct 2376 CGGTATTCGGAGTTTGCATAGGTTTGGTAAGTCGCCATGACCCCCTAGCCTAAACAGTGC 2317 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| ||| | | || || || || |||||||| |||||| ||||||||||| Sbjct 2316 TCTACCCCCGC-AGGTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAGCT 2258 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CAAC 229 || | ||||||| || ||||||||||||||||||||| |||||| || |||||| |||| Sbjct 2257 ATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCAAC 2199 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 ||| ||||||| |||||| | |||| ||||| |||| |||||||||||| Sbjct 2198 ACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCATGGATAGAT 2139 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 ||||| | ||||||||| | | || ||| || ||||||||||||||||| |||| ||| Sbjct 2138 CACTTGGTTTCGGGTCTACACCCAGCGACTGAT-CGCCCTATTCGGACTCGATTTCTCTA 2080 Query 350 CGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409 ||||| ||| | | ||||||||| || || || | || |||| | | |||| | ||| Sbjct 2079 CGGCTTCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATTATACAA 2022 Query 410 AAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACAT 469 |||| |||| ||||| ||| || ||||| || ||||| ||| Sbjct 2021 AAGGTACGCAGTCAC------CCT----TGC----GGGCTCCTACTTTTTGTAAGCATGC 1976 Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||||| Sbjct 1975 GGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 1916 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 || | ||||||||| | |||||||||| ||| || ||||||| ||| |||| | Sbjct 1915 AGTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGA 1856 Query 590 CGAAATTTCA 599 | |||||| Sbjct 1855 CAGGATTTCA 1846 >seq2085 Length=1247 Score = 100 bits (110), Expect = 1e-18 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 501 GGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAG 560 ||| ||||||||||||||||||||||||| || |||||||||||| | |||||||||| Sbjct 1247 GGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCTATCGGTCATGTACGAGTATTTAG 1188 Query 561 GCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||| |||||||||| ||| |||| || Sbjct 1187 GCTTGGAGGGTGGTCCCCCCATGTTCAGAC 1158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817550488576