Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1046 405 1e-110 seq2085 125 2e-26 >seq1046 Length=23093 Score = 405 bits (448), Expect = 1e-110 Identities = 347/415 (84%), Gaps = 14/415 (3%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| |||||| |||| |||| |||||||||||| |||||||| Sbjct 2230 CCTATCCACAGCTCAT-CCGCTAG-TTTTGCAACACTAGTCGGTTCGGACCTCCAGTACC 2173 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||| ||||| || |||| |||| ||||||||| | ||||| |||||||| | Sbjct 2172 T-GTTACGGCACCTT-CATCCTGGCCAT-GGATAGATCACTTGGTTT-CGGGTCTACA-C 2118 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||||||| ||||||| | |||||| ||| | ||||| || |||||||||||||| Sbjct 2117 CCAGCGACTGATCGCCCTATTCGGACTCGATTT-CTCTACGGCTTCCCTATTCGGTTAAC 2059 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2058 CTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCTT--- 2003 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | ||||||| ||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 2002 -GCGGGCTCCTACTTTTTGTAAGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 1945 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct 1944 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCGATTACGAGTATTTAG 1885 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||| |||||||| |||| |||| ||| |||||| Sbjct 1884 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 1830 >seq2085 Length=1247 Score = 125 bits (138), Expect = 2e-26 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||| |||||| ||||||||||||||||||||||| |||||||||| | ||||||||| Sbjct 1247 GGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCTATCGGTCATGTACGAGTATTTAG 1188 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| |||||||||||| |||||||| || | |||| ||| |||||||| Sbjct 1187 GCTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTACACGTGTCCCGCCCTACTCG 1131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241566178816