Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1046 167 5e-39 >seq1046 Length=23093 Score = 167 bits (184), Expect = 5e-39 Identities = 289/407 (71%), Gaps = 20/407 (5%) Strand=Plus/Minus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||| | || || ||| | | | Sbjct 2824 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACTCTACGCCGATGAACGTTGCGTAG 2765 Query 64 GAACCCTTG-GATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGC 121 || ||||| | | | ||||| |||| || |||||| | |||||||||||||| || Sbjct 2764 AAAACCTTGCGCTTA-CGGCGAGCGGGCTTTTCACCCGCTTTAACGCTACTCATGCCAGC 2706 Query 122 ATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGA 179 |||| |||| | || | ||||| || | || | | || |||||| || ||| | Sbjct 2705 ATTCGCACTTCTGAT-ACCTCCAGCATCCC-TCTCGAGACACCTTCACAGGCTTACAGAA 2648 Query 180 CGCTCCCCTACC-CAACCACACAGGTTG----CCACAGCTTCGGCGGATAACT---TAAG 231 ||||| |||||| | ||| || || ||||||||| ||||| | || Sbjct 2647 CGCTCTCCTACCACTTGCACTTGCGTGCAAATCCGCAGCTTCGG----TAACTGGCTTAG 2592 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | | ||| || |||||||||||||||| ||||| || Sbjct 2591 CCCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAT 2532 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 |||||||||||| |||||||| ||||| ||| | || |||| || ||||||||| Sbjct 2531 GATGGCTGCTTCTAAGCCAACATCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTT 2472 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || |||||| ||||||||| | |||||| ||||||||||| Sbjct 2471 AGCCA-ATTTTAGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177567922176