Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq2071 230 6e-56 seq1636 163 7e-36 >seq2071 Length=31734 Score = 230 bits (254), Expect = 6e-56 Identities = 496/738 (67%), Gaps = 8/738 (1%) Strand=Plus/Minus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || || |||||||| ||||||||| |||| | || ||| || | | Sbjct 12049 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 11990 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 ||||| || ||||| ||||| || || || | || | |||||||| | || ||| Sbjct 11989 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 11930 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | | ||| | || | | | ||| ||| |||||||| || Sbjct 11929 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 11870 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| || |||||| ||| ||||||| || || ||| | ||||||| ||| |||||| Sbjct 11869 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCGC 11810 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAG-AT 38007 ||| | | | ||||| ||||||||||||||| | || ||||| || Sbjct 11809 AGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGT-GAAGACCAT 11751 Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 ||| |||||| | || ||||| | | || ||||| ||||| || || || | Sbjct 11750 CAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCC 11691 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 ||||| |||| |||| || || ||| ||| |||||||| ||||| ||||| Sbjct 11690 GAAGATGGCGCTGGCGCCCTGCCA---CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAA 11634 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | |||| ||| | | | |||||| | || | || | || ||||||| ||||| Sbjct 11633 GCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 11574 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||||||||| | ||||| ||| | || || || |||||| ||| ||||| || Sbjct 11573 CGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGA 11514 Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304 |||| | |||||||||||| ||| | |||| || || | || || | | |||| Sbjct 11513 CTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACT 11454 Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364 |||||| | ||| |||| | || || ||| | | || || |||||| |||| Sbjct 11453 GCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTC 11394 Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424 ||||| ||||| ||||| ||||| || || | | |||| | | ||||||||||| Sbjct 11393 GATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGAT 11334 Query 38425 TAAAGCACCGGTGGCGGT 38442 || || || |||||||| Sbjct 11333 CAAGGCGCCCGTGGCGGT 11316 >seq1636 Length=1555 Score = 163 bits (180), Expect = 7e-36 Identities = 377/561 (67%), Gaps = 8/561 (1%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || ||| |||||||| || ||||||| |||| | || ||| | | Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || || ||| | | || || || ||| |||| | ||||| ||||| || || Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGA--GAATGGCGTGACGA 37886 || ||||| | ||||| || ||||| |||| ||||||| | | || | | | Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGG--TCAGCA 790 Query 37887 TTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGC 37946 | ||||| || |||||||| || || |||||||||||| | || ||| |||||||| Sbjct 791 TCTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGC 850 Query 37947 GCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGA 38006 || ||| | || ||||| ||||||||||||| || | || | || | Sbjct 851 GCGACTGGGTGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACA 910 Query 38007 TCAA-ACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTG 38065 |||| || || |||| | | ||||| | | | || | ||| ||||| | || | Sbjct 911 TCAAGACCAACCCCGCCT-CGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTC 969 Query 38066 GACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGG 38125 ||| ||| |||| |||||||||||| | || ||| ||||||||| ||||||||| Sbjct 970 CACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGG 1029 Query 38126 TTGTCA-TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 |||| |||| | | |||||||| | || | || | || ||||||| ||||| Sbjct 1030 CTGTCGCTGCAACTCT-ACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACAT 1088 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||| |||||| | || || ||| | || || ||||||| |||| || || Sbjct 1089 CGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGA 1148 Query 38245 ACTCATTTTCACCGGCGGCGA 38265 |||| | ||||||||||| Sbjct 1149 GTTCATCTGGACCGGCGGCGA 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130635774122600