Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 230 6e-56
seq1636 163 7e-36
>seq2071
Length=31734
Score = 230 bits (254), Expect = 6e-56
Identities = 496/738 (67%), Gaps = 8/738 (1%)
Strand=Plus/Minus
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || || |||||||| ||||||||| |||| | || ||| || | |
Sbjct 12049 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 11990
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
||||| || ||||| ||||| || || || | || | |||||||| | || |||
Sbjct 11989 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 11930
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888
|| ||||| | | ||| | || | | | ||| ||| |||||||| ||
Sbjct 11929 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 11870
Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948
||||| || |||||| ||| ||||||| || || ||| | ||||||| ||| ||||||
Sbjct 11869 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCGC 11810
Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAG-AT 38007
||| | | | ||||| ||||||||||||||| | || ||||| ||
Sbjct 11809 AGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGT-GAAGACCAT 11751
Query 38008 CAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067
||| |||||| | || ||||| | | || ||||| ||||| || || || |
Sbjct 11750 CAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCC 11691
Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124
||||| |||| |||| || || ||| ||| |||||||| ||||| |||||
Sbjct 11690 GAAGATGGCGCTGGCGCCCTGCCA---CGCGTTCTTCCAGTTCTACGTCGCGGACGGCAA 11634
Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184
| |||| ||| | | | |||||| | || | || | || ||||||| |||||
Sbjct 11633 GCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACAT 11574
Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244
||| ||||||||||| | ||||| ||| | || || || |||||| ||| ||||| ||
Sbjct 11573 CGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGA 11514
Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304
|||| | |||||||||||| ||| | |||| || || | || || | | ||||
Sbjct 11513 CTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACT 11454
Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364
|||||| | ||| |||| | || || ||| | | || || |||||| ||||
Sbjct 11453 GCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTC 11394
Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424
||||| ||||| ||||| ||||| || || | | |||| | | |||||||||||
Sbjct 11393 GATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGAT 11334
Query 38425 TAAAGCACCGGTGGCGGT 38442
|| || || ||||||||
Sbjct 11333 CAAGGCGCCCGTGGCGGT 11316
>seq1636
Length=1555
Score = 163 bits (180), Expect = 7e-36
Identities = 377/561 (67%), Gaps = 8/561 (1%)
Strand=Plus/Plus
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || ||| |||||||| || ||||||| |||| | || ||| | |
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
|| || || ||| | | || || || ||| |||| | ||||| ||||| || ||
Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGA--GAATGGCGTGACGA 37886
|| ||||| | ||||| || ||||| |||| ||||||| | | || | | |
Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGG--TCAGCA 790
Query 37887 TTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGC 37946
| ||||| || |||||||| || || |||||||||||| | || ||| ||||||||
Sbjct 791 TCTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGC 850
Query 37947 GCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGA 38006
|| ||| | || ||||| ||||||||||||| || | || | || |
Sbjct 851 GCGACTGGGTGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACA 910
Query 38007 TCAA-ACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTG 38065
|||| || || |||| | | ||||| | | | || | ||| ||||| | || |
Sbjct 911 TCAAGACCAACCCCGCCT-CGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTC 969
Query 38066 GACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGG 38125
||| ||| |||| |||||||||||| | || ||| ||||||||| |||||||||
Sbjct 970 CACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGG 1029
Query 38126 TTGTCA-TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184
|||| |||| | | |||||||| | || | || | || ||||||| |||||
Sbjct 1030 CTGTCGCTGCAACTCT-ACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACAT 1088
Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244
||| ||||| |||||| | || || ||| | || || ||||||| |||| || ||
Sbjct 1089 CGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGA 1148
Query 38245 ACTCATTTTCACCGGCGGCGA 38265
|||| | |||||||||||
Sbjct 1149 GTTCATCTGGACCGGCGGCGA 1169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130635774122600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |