Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2704 168 5e-37
seq2528 165 6e-36
>seq2704
Length=633058
Score = 168 bits (186), Expect = 5e-37
Identities = 306/439 (70%), Gaps = 13/439 (3%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | || |||||| | ||||||||||| || |||||| | ||||| ||| ||
Sbjct 56583 GCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGGCTG 56524
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| |||||||| || || |||||| |||||| |||| || |||||||||
Sbjct 56523 AAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGACGAG 56464
Query 61618 GGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG-- 61674
||| | || ||| |||| |||| || || ||| | | || || | || |||
Sbjct 56463 GGCCTCCACACTGACTTTGCCTGTCTT-CTCTTCTCTCACCTTC--GT-CACCGCCCGAG 56408
Query 61675 -TCGGAGGAGCGT-GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732
| ||| ||| | || || || | || || || |||||| | |||||
Sbjct 56407 CCCCCAGG-CCGTCGAGGCTG---TTATCACAGAAGCTGTCGAGATCGAAAAAGAATTCT 56352
Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792
|||| || || | || | | || |||||||||| | ||| |||| || || |
Sbjct 56351 TGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACTCATGTGCCAATACA 56292
Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852
| || ||||| |||||| | || | |||| | | |||| ||| | ||||||| |||
Sbjct 56291 TCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATAAGAAGTACTATAATGCGA 56232
Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912
|||||||| || |||||||||| ||||||||| || ||||| || || || ||||
Sbjct 56231 CGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGA 56172
Query 61913 AACGTGTAGGCGACTATCA 61931
| || || |||||||| ||
Sbjct 56171 AGCGCGTCGGCGACTACCA 56153
Score = 102 bits (112), Expect = 6e-17
Identities = 200/295 (68%), Gaps = 3/295 (1%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| || || || || ||||||||||| | || ||| |||| ||
Sbjct 57059 ATCTGGCAAATGTACAAGAAAGCAGAGGCATCCTTCTGGACTGCCGAAGAGATCGACCTG 57000
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAG---CGGTGAACAACATTTCATTAAA 61203
|| || || | | |||||| | | | || || ||||| | |||||
Sbjct 56999 TCGAAGGATCTTCACGACTGGAACCACCGACTGAATGACGATGAACGCTACTTCATCTCT 56940
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
| || ||||| ||||| || ||||| || ||||| ||||||||||| | | |||||
Sbjct 56939 CGCGTCTTGGCCTTCTTCGCTGCTTCCGATGGTATTGTCAATGAGAACCTTGTCGAACGC 56880
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| || || ||| | |||| || || || ||||| ||||||||||| |||
Sbjct 56879 TTCAGTGGTGAAGTCCAAATCCCGGAAGCCCGATGCTTCTATGGCTTCCAGATCATGATG 56820
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|| || | ||||| |||| ||| | || || ||||| || |||| |||||
Sbjct 56819 GAAAACATTCACTCCGAGACTTACTCCCTCCTTATTGATACATATATCAAGGAGC 56765
>seq2528
Length=594046
Score = 165 bits (182), Expect = 6e-36
Identities = 421/641 (66%), Gaps = 0/641 (0%)
Strand=Plus/Minus
Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358
||||| | || | |||||| || | || || || || |||||| | ||| || ||
Sbjct 61407 GGACAGAACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTC 61348
Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418
||||| || |||||||| || |||| ||||| | ||||| ||||| || |
Sbjct 61347 CAGAGAGCAAGAAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGA 61288
Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478
|| | || || ||||| |||| ||||| ||||| || ||||||||||| | ||
Sbjct 61287 TCCAAAAATTCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGT 61228
Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538
||||| |||||| ||||| || |||||||| |||||||||||||| | ||| ||
Sbjct 61227 CGTTTATTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGG 61168
Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598
| || |||||||| |||||| || || | ||| ||| || || || ||| |
Sbjct 61167 ATGATTCCGTTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGG 61108
Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTC 66658
|| ||||| |||||||||||||| || ||||| || || ||||| | ||
Sbjct 61107 TGTACATTAAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTA 61048
Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718
| | || || || || || |||| ||| | |||| | || || | |||
Sbjct 61047 TCGTAGATACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGT 60988
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
|| | || || | || ||| || ||||| | |||||| || ||| | | | |||
Sbjct 60987 GGCTGTGGAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGAC 60928
Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838
|| ||||||| || || || | ||||||| ||||| ||||| || | |||
Sbjct 60927 ATCAAATTGTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACC 60868
Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898
||||| | | || || || || ||| | | | | ||||| ||| | || ||
Sbjct 60867 CGCATAATCATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGAC 60808
Query 66899 CGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
|| || || ||||||| ||||| || ||| || |||||
Sbjct 60807 CGCTCTAGTGTCTTGAAGCCAAAATATTGGTAGTTAAAATC 60767
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059
|||| | |||||| ||||| |||||||| || || | || || || ||||| |||||||
Sbjct 61758 TGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTACTCGA 61699
Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
||||| ||||| || || || || || || || | || | || || |||||||
Sbjct 61698 TGATTTCCGTGCAGAGGTTCGAGCTTCGAATAGTTCCAAGGTTTTTCTGGTTGCTCTTGC 61639
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
| ||||| ||||||||||| | |||| |||| | || ||||| || | || | ||
Sbjct 61638 GGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTCTAGGA 61579
Query 66180 TGGCGTGCCAAAG 66192
|||| | ||||||
Sbjct 61578 TGGCATACCAAAG 61566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397554801239360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |