Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2704 168 5e-37 seq2528 165 6e-36 >seq2704 Length=633058 Score = 168 bits (186), Expect = 5e-37 Identities = 306/439 (70%), Gaps = 13/439 (3%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | ||||||||||| || |||||| | ||||| ||| || Sbjct 56583 GCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGGCTG 56524 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| |||||||| || || |||||| |||||| |||| || ||||||||| Sbjct 56523 AAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGACGAG 56464 Query 61618 GGCATGCATTGTGATTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG-- 61674 ||| | || ||| |||| |||| || || ||| | | || || | || ||| Sbjct 56463 GGCCTCCACACTGACTTTGCCTGTCTT-CTCTTCTCTCACCTTC--GT-CACCGCCCGAG 56408 Query 61675 -TCGGAGGAGCGT-GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTC 61732 | ||| ||| | || || || | || || || |||||| | ||||| Sbjct 56407 CCCCCAGG-CCGTCGAGGCTG---TTATCACAGAAGCTGTCGAGATCGAAAAAGAATTCT 56352 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 |||| || || | || | | || |||||||||| | ||| |||| || || | Sbjct 56351 TGACCGATGCCCTTCCTTGCGCCCTTCTCGGCATGAACTCCAAACTCATGTGCCAATACA 56292 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGA 61852 | || ||||| |||||| | || | |||| | | |||| ||| | ||||||| ||| Sbjct 56291 TCGAGTTTGTCGCCGACAGGTTGCTTGTCGCTCTTGGTAATAAGAAGTACTATAATGCGA 56232 Query 61853 AAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 |||||||| || |||||||||| ||||||||| || ||||| || || || |||| Sbjct 56231 CGAACCCATTCGACTTCATGGACAACATTTCGCTGTCCGGTAAGACAAACTTCTTTGAGA 56172 Query 61913 AACGTGTAGGCGACTATCA 61931 | || || |||||||| || Sbjct 56171 AGCGCGTCGGCGACTACCA 56153 Score = 102 bits (112), Expect = 6e-17 Identities = 200/295 (68%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || || || || ||||||||||| | || ||| |||| || Sbjct 57059 ATCTGGCAAATGTACAAGAAAGCAGAGGCATCCTTCTGGACTGCCGAAGAGATCGACCTG 57000 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAG---CGGTGAACAACATTTCATTAAA 61203 || || || | | |||||| | | | || || ||||| | ||||| Sbjct 56999 TCGAAGGATCTTCACGACTGGAACCACCGACTGAATGACGATGAACGCTACTTCATCTCT 56940 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 | || ||||| ||||| || ||||| || ||||| ||||||||||| | | ||||| Sbjct 56939 CGCGTCTTGGCCTTCTTCGCTGCTTCCGATGGTATTGTCAATGAGAACCTTGTCGAACGC 56880 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || ||| | |||| || || || ||||| ||||||||||| ||| Sbjct 56879 TTCAGTGGTGAAGTCCAAATCCCGGAAGCCCGATGCTTCTATGGCTTCCAGATCATGATG 56820 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 || || | ||||| |||| ||| | || || ||||| || |||| ||||| Sbjct 56819 GAAAACATTCACTCCGAGACTTACTCCCTCCTTATTGATACATATATCAAGGAGC 56765 >seq2528 Length=594046 Score = 165 bits (182), Expect = 6e-36 Identities = 421/641 (66%), Gaps = 0/641 (0%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | || | |||||| || | || || || || |||||| | ||| || || Sbjct 61407 GGACAGAACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTC 61348 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 ||||| || |||||||| || |||| ||||| | ||||| ||||| || | Sbjct 61347 CAGAGAGCAAGAAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGA 61288 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || | || || ||||| |||| ||||| ||||| || ||||||||||| | || Sbjct 61287 TCCAAAAATTCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGT 61228 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 ||||| |||||| ||||| || |||||||| |||||||||||||| | ||| || Sbjct 61227 CGTTTATTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGG 61168 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCG 66598 | || |||||||| |||||| || || | ||| ||| || || || ||| | Sbjct 61167 ATGATTCCGTTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGG 61108 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTC 66658 || ||||| |||||||||||||| || ||||| || || ||||| | || Sbjct 61107 TGTACATTAAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTA 61048 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | || || || || || |||| ||| | |||| | || || | ||| Sbjct 61047 TCGTAGATACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGT 60988 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || | || || | || ||| || ||||| | |||||| || ||| | | | ||| Sbjct 60987 GGCTGTGGAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGAC 60928 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 || ||||||| || || || | ||||||| ||||| ||||| || | ||| Sbjct 60927 ATCAAATTGTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACC 60868 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| | | || || || || ||| | | | | ||||| ||| | || || Sbjct 60867 CGCATAATCATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGAC 60808 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || || || ||||||| ||||| || ||| || ||||| Sbjct 60807 CGCTCTAGTGTCTTGAAGCCAAAATATTGGTAGTTAAAATC 60767 Score = 105 bits (116), Expect = 5e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 66000 TGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGA 66059 |||| | |||||| ||||| |||||||| || || | || || || ||||| ||||||| Sbjct 61758 TGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTACTCGA 61699 Query 66060 CAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 ||||| ||||| || || || || || || || | || | || || ||||||| Sbjct 61698 TGATTTCCGTGCAGAGGTTCGAGCTTCGAATAGTTCCAAGGTTTTTCTGGTTGCTCTTGC 61639 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | ||||| ||||||||||| | |||| |||| | || ||||| || | || | || Sbjct 61638 GGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTCTAGGA 61579 Query 66180 TGGCGTGCCAAAG 66192 |||| | |||||| Sbjct 61578 TGGCATACCAAAG 61566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397554801239360