Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 136 6e-27
seq1636 114 2e-20
>seq2071
Length=31734
Score = 136 bits (150), Expect = 6e-27
Identities = 218/313 (70%), Gaps = 0/313 (0%)
Strand=Plus/Minus
Query 196779 TGTCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCG 196838
|||| || |||||||| ||||| ||||| || || ||||| || || |||||||||||||
Sbjct 11631 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 11572
Query 196839 CGTCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGT 196898
| ||||| | || | |||||| | ||||| ||| || ||| ||||| |
Sbjct 11571 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACT 11512
Query 196899 TCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC 196958
|| | ||||| ||||| ||| |||||||||| ||| ||| || ||||| ||| |
Sbjct 11511 TCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTGC 11452
Query 196959 AGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTA 197018
|||| || || | || | | | || ||||| ||||| ||||| |||| |
Sbjct 11451 AGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGA 11392
Query 197019 TCTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTA 197078
||||||| ||| | ||| |||||||| | | | |||| | | ||||||||||| |
Sbjct 11391 TCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCA 11332
Query 197079 AAGCCCCGGTGGC 197091
| || || |||||
Sbjct 11331 AGGCGCCCGTGGC 11319
Score = 125 bits (138), Expect = 1e-23
Identities = 182/253 (72%), Gaps = 3/253 (1%)
Strand=Plus/Minus
Query 196112 CACGACAAAG-CTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGC 196169
|||| | ||| | ||||| ||||| || ||||| | | | | ||||| |||||||
Sbjct 12062 CACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGT-TCGGCTACCAGATGC 12004
Query 196170 GCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCA 196229
| ||||| ||| | || || ||||||||||| ||||| ||||| |||| ||| ||||
Sbjct 12003 GGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCA 11944
Query 196230 TCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACA 196289
|||| || || |||||||||||||| | || | | ||| ||| | ||| ||
Sbjct 11943 TCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGC 11884
Query 196290 ACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACG 196349
||| || | |||||| |||| |||||| ||| ||| ||||||||||||| ||||
Sbjct 11883 GCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACG 11824
Query 196350 GTAAGCAGTGGCG 196362
| |||||||||
Sbjct 11823 GCGTGCAGTGGCG 11811
>seq1636
Length=1555
Score = 114 bits (126), Expect = 2e-20
Identities = 175/247 (71%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182
||||| |||||||| ||||| | | | | ||||| |||||||| |||||||||
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCT-TCGGCCACCAGATGCGGTTCGATCTGGC 671
Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242
|| || |||||| || ||||||| |||||||| || ||||| || ||||| || |
Sbjct 672 CGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTT 731
Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302
|||||||||||| ||| ||||||||| | | ||| | || | ||| ||
Sbjct 732 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 791
Query 196303 CTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362
|||| |||| |||||| | || ||| | || || ||||| || || ||||| |||||
Sbjct 792 CTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 851
Query 196363 TGAATGG 196369
|| |||
Sbjct 852 CGACTGG 858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 771516128981280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |