Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq2071 136 6e-27 seq1636 114 2e-20 >seq2071 Length=31734 Score = 136 bits (150), Expect = 6e-27 Identities = 218/313 (70%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 196779 TGTCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCG 196838 |||| || |||||||| ||||| ||||| || || ||||| || || ||||||||||||| Sbjct 11631 TGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCG 11572 Query 196839 CGTCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGT 196898 | ||||| | || | |||||| | ||||| ||| || ||| ||||| | Sbjct 11571 CCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACT 11512 Query 196899 TCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC 196958 || | ||||| ||||| ||| |||||||||| ||| ||| || ||||| ||| | Sbjct 11511 TCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTGC 11452 Query 196959 AGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTA 197018 |||| || || | || | | | || ||||| ||||| ||||| |||| | Sbjct 11451 AGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCGA 11392 Query 197019 TCTTCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTACGATCCGCATCCGGCGATTA 197078 ||||||| ||| | ||| |||||||| | | | |||| | | ||||||||||| | Sbjct 11391 TCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCA 11332 Query 197079 AAGCCCCGGTGGC 197091 | || || ||||| Sbjct 11331 AGGCGCCCGTGGC 11319 Score = 125 bits (138), Expect = 1e-23 Identities = 182/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 196112 CACGACAAAG-CTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGC 196169 |||| | ||| | ||||| ||||| || ||||| | | | | ||||| ||||||| Sbjct 12062 CACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGT-TCGGCTACCAGATGC 12004 Query 196170 GCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCA 196229 | ||||| ||| | || || ||||||||||| ||||| ||||| |||| ||| |||| Sbjct 12003 GGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCA 11944 Query 196230 TCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACA 196289 |||| || || |||||||||||||| | || | | ||| ||| | ||| || Sbjct 11943 TCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGC 11884 Query 196290 ACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACG 196349 ||| || | |||||| |||| |||||| ||| ||| ||||||||||||| |||| Sbjct 11883 GCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACG 11824 Query 196350 GTAAGCAGTGGCG 196362 | ||||||||| Sbjct 11823 GCGTGCAGTGGCG 11811 >seq1636 Length=1555 Score = 114 bits (126), Expect = 2e-20 Identities = 175/247 (71%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182 ||||| |||||||| ||||| | | | | ||||| |||||||| ||||||||| Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCT-TCGGCCACCAGATGCGGTTCGATCTGGC 671 Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242 || || |||||| || ||||||| |||||||| || ||||| || ||||| || | Sbjct 672 CGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTT 731 Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302 |||||||||||| ||| ||||||||| | | ||| | || | ||| || Sbjct 732 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 791 Query 196303 CTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362 |||| |||| |||||| | || ||| | || || ||||| || || ||||| ||||| Sbjct 792 CTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 851 Query 196363 TGAATGG 196369 || ||| Sbjct 852 CGACTGG 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771516128981280