Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq653 118 1e-21 seq1046 86.0 9e-12 >seq653 Length=29589 Score = 118 bits (130), Expect = 1e-21 Identities = 388/602 (64%), Gaps = 31/602 (5%) Strand=Plus/Plus Query 162100 AAAGTAGCACTTATTACTGGGATCACAGGGCAAGATGGATCTTACCTAGCTGAACTTCTC 162159 || || || ||| | || || | || || ||||| ||||| || ||||| ||| |||| Sbjct 16551 AAGGTTGCGCTTGTCACCGGTGTTACCGGTCAAGACGGATCATATCTAGCAGAATTTCTG 16610 Query 162160 CTTCAGAAAGGATATACAGTTCACGGTATTATCCGTCGTGCTTCTATGATTAACACCCAC 162219 || | ||||| ||| || ||||| |||| || ||||| || || |||| || || Sbjct 16611 CTGGAAAAAGGCTATGAGGTACACGGCATTAAGCGCCGTGCGTCATTGTTTAATACACAG 16670 Query 162220 AGAATTGACCATATCTTTGAC--------CGCATCA---------CT----CTCCATTAT 162258 | ||||||||||||| ||| |||| || || || |||||| Sbjct 16671 CGTATTGACCATATCTATGAAGATCCTCACGCACCATCGCCAGACCTTCGGCTTCATTAT 16730 Query 162259 GGAGACCTTACCGATGCTTTGAGTAT----CGTATCTATTATTAAAACAGTTCAACCAGA 162314 || || | |||| ||| | | | || ||| || | || || || || Sbjct 16731 GGCGATTTATCCGACTCTTCTAATTTGACCCGCATC----ATGCAGGAGGTACAGCCGGA 16786 Query 162315 TGAAATATATAACCTAGGGGCTCAGAGTCACGTTAAGGTTTCATTTGATCAGCCTGAATA 162374 || | |||||||| || ||||| |||||||| ||| ||||| ||| ||||| Sbjct 16787 CGAGGTTTATAACCTCGGTGCTCAAAGTCACGTGGCTGTTAGTTTTGAAGCGCCGGAATA 16846 Query 162375 CACAGCACAGACCGACGCATTGGGCACTCTAAGGGTGCTAGAAGCCGTCCGTCTTCTTGG 162434 || || | || | | || || | | |||| ||||| | || ||| |||| Sbjct 16847 TACCGCGGATGTTGATGGGCTTGGTACGTTGCGTTTGCTGGAAGCAATTCG-CTTTTTGG 16905 Query 162435 TATGGAATCATACGTAAGAAT-CTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTC 162493 || | | | | | | ||| |||||| ||| || || ||||| || || | Sbjct 16906 GATTGGAGAAGAAGACAAAATTCTACCAGGCGTCGACGTCGGAACTTTACGGATCGGTGC 16965 Query 162494 AGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTA 162553 |||| ||||| ||| || | ||| ||| | ||||| ||||| || |||| || || | Sbjct 16966 AGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGTAGCAA 17025 Query 162554 AACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTA 162613 | ||||| | | ||||| | |||||| | ||| ||||| |||| | || | | Sbjct 17026 AGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGCTTGCA 17085 Query 162614 GCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGA 162673 || || || || |||||||||||| |||| ||||| ||||| ||||| || ||||| | Sbjct 17086 ATGGCATCCTGTTTAATCACGAAAGCCCACGTAGAGGCGAGACATTCGTAACGCGCAAAA 17145 Query 162674 TC 162675 || Sbjct 17146 TC 17147 >seq1046 Length=23093 Score = 86.0 bits (94), Expect = 9e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142792 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851 ||||| |||||||||| ||| ||||| ||||||||||||||||| ||| |||||||| Sbjct 1104 CGGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAT 1163 Query 142852 TCCGTTATTCTCCACCA 142868 |||| || |||||||| Sbjct 1164 CCCGTCATCCTCCACCA 1180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691435655814240