Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2590 513 3e-143 seq2061 168 1e-39 >seq2590 Length=12849 Score = 513 bits (568), Expect = 3e-143 Identities = 302/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 3720 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3779 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3780 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 3839 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3840 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 3899 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3900 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 3959 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 3960 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 4019 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 4020 ACGAAAGTTAGGGG 4033 >seq2061 Length=24901 Score = 168 bits (186), Expect = 1e-39 Identities = 125/146 (86%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 || ||||| ||||||||| |||||||||||||||||| |||| ||| || ||| |||||| Sbjct 20818 GGTCTTTCTTTCTGGGGAGCCGCATGCCCTTCACTGGATGTGTCGGAGAACCATGACTTT 20759 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135 ||||| ||||| | |||||| ||||| ||| || |||||||||||||||||||||||| Sbjct 20758 CACTTTAAAAAAGTGAGAGTGGCCAAAGGAGGTCTATGCTCGAATACATTAGCATGGAAT 20699 Query 136 AATAGAATAGGACGTGCGGTTCTATT 161 | ||||||||||||||| |||| || Sbjct 20698 AGTAGAATAGGACGTGCAATTCTCTT 20673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915176168192