Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2590 513 3e-143
seq2061 168 1e-39
>seq2590
Length=12849
Score = 513 bits (568), Expect = 3e-143
Identities = 302/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3720 TGGTCCGACCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3779
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3780 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 3839
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3840 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 3899
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3900 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 3959
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 3960 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 4019
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 4020 ACGAAAGTTAGGGG 4033
>seq2061
Length=24901
Score = 168 bits (186), Expect = 1e-39
Identities = 125/146 (86%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75
|| ||||| ||||||||| |||||||||||||||||| |||| ||| || ||| ||||||
Sbjct 20818 GGTCTTTCTTTCTGGGGAGCCGCATGCCCTTCACTGGATGTGTCGGAGAACCATGACTTT 20759
Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT 135
||||| ||||| | |||||| ||||| ||| || ||||||||||||||||||||||||
Sbjct 20758 CACTTTAAAAAAGTGAGAGTGGCCAAAGGAGGTCTATGCTCGAATACATTAGCATGGAAT 20699
Query 136 AATAGAATAGGACGTGCGGTTCTATT 161
| ||||||||||||||| |||| ||
Sbjct 20698 AGTAGAATAGGACGTGCAATTCTCTT 20673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915176168192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |