Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1175 93.3 1e-16 >seq1175 Length=12788 Score = 93.3 bits (102), Expect = 1e-16 Identities = 193/283 (68%), Gaps = 12/283 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 7627 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 7686 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 7687 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 7746 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTAGC 182 || | || | || ||||||| || | ||||| ||| |||| | ||| |||| Sbjct 7747 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAACTT-ATATTAGT 7805 Query 183 TAACC----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 |||| || |||||| ||| || |||||| |||||| | |||| | | Sbjct 7806 CAACCTAGAAAATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGAT 7865 Query 239 TT-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | | | ||||| |||||| |||||| | |||||||||| Sbjct 7866 TTATTATCTTATTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 7908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260767168768