Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1175 93.3 1e-16
>seq1175
Length=12788
Score = 93.3 bits (102), Expect = 1e-16
Identities = 193/283 (68%), Gaps = 12/283 (4%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 7627 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 7686
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 7687 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 7746
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTAGC 182
|| | || | || ||||||| || | ||||| ||| |||| | ||| ||||
Sbjct 7747 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAACTT-ATATTAGT 7805
Query 183 TAACC----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
|||| || |||||| ||| || |||||| |||||| | |||| | |
Sbjct 7806 CAACCTAGAAAATTCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGAT 7865
Query 239 TT-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | | | ||||| |||||| |||||| | ||||||||||
Sbjct 7866 TTATTATCTTATTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 7908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260767168768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |