Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2590 273 3e-71
>seq2590
Length=12849
Score = 273 bits (302), Expect = 3e-71
Identities = 180/198 (91%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||
Sbjct 4808 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAGC 4750
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|||| ||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct 4749 GACCAGCCAAAGCTAGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 4690
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 4689 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 4630
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 4629 AAGAGCTCTCAATCTGTC 4612
Score = 98.7 bits (108), Expect = 2e-18
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5207 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796779899724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |