Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2590 185 1e-44 seq2061 107 2e-21 >seq2590 Length=12849 Score = 185 bits (204), Expect = 1e-44 Identities = 160/193 (83%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 3890 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3831 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 3830 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 3771 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182 || ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| | ||| Sbjct 3770 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCACGC 3712 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 3711 GGTGAGGCGGACC 3699 >seq2061 Length=24901 Score = 107 bits (118), Expect = 2e-21 Identities = 104/127 (82%), Gaps = 5/127 (4%) Strand=Plus/Plus Query 29 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACT 88 ||||||||||||||| ||||||||||||||||||||| || || ||| ||||| |||| Sbjct 20682 GCACGTCCTATTCTACTATTCCATGCTAATGTATTCGAGCATAGACCTCCTTTGGCCACT 20741 Query 89 CTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-CACA-CCAATGAA-GGCATACGGG 145 || | ||| | || || |||||| ||||| ||||| |||| ||| |||| ||||| | || Sbjct 20742 CTCACTTTTTTAAAGTGAAAGTCATGGTT-CTCCGACACATCCAGTGAAGGGCATGC-GG 20799 Query 146 CTCACCA 152 ||| ||| Sbjct 20800 CTCCCCA 20806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595184985336