Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq2590 185 1e-44
seq2061 107 2e-21
>seq2590
Length=12849
Score = 185 bits (204), Expect = 1e-44
Identities = 160/193 (83%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 3890 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3831
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 3830 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 3771
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| | | | ||| |||| | |||
Sbjct 3770 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGACCCGGTCGGACCAGTGCACGC 3712
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 3711 GGTGAGGCGGACC 3699
>seq2061
Length=24901
Score = 107 bits (118), Expect = 2e-21
Identities = 104/127 (82%), Gaps = 5/127 (4%)
Strand=Plus/Plus
Query 29 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACT 88
||||||||||||||| ||||||||||||||||||||| || || ||| ||||| ||||
Sbjct 20682 GCACGTCCTATTCTACTATTCCATGCTAATGTATTCGAGCATAGACCTCCTTTGGCCACT 20741
Query 89 CTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-CACA-CCAATGAA-GGCATACGGG 145
|| | ||| | || || |||||| ||||| ||||| |||| ||| |||| ||||| | ||
Sbjct 20742 CTCACTTTTTTAAAGTGAAAGTCATGGTT-CTCCGACACATCCAGTGAAGGGCATGC-GG 20799
Query 146 CTCACCA 152
||| |||
Sbjct 20800 CTCCCCA 20806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595184985336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |