Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2590 291 8e-77
seq2061 107 2e-21
>seq2590
Length=12849
Score = 291 bits (322), Expect = 8e-77
Identities = 180/191 (94%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 3777 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 3836
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 3837 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 3895
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 3896 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3955
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 3956 TTGGATTTATT 3966
>seq2061
Length=24901
Score = 107 bits (118), Expect = 2e-21
Identities = 83/99 (84%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||| |||||| ||||| ||||| | |||| | ||||| ||| || |||||||||||
Sbjct 20771 GAACCATGACTTTCACTTTAAAAAAGTGAGAGTGGCCAAAGGAGGTCTATGCTCGAATAC 20712
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATT 100
|||| ||||||||| ||||||||||||||| |||| ||
Sbjct 20711 ATTAGCATGGAATAGTAGAATAGGACGTGCAATTCTCTT 20673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511987084160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |