Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2590 291 8e-77 seq2061 107 2e-21 >seq2590 Length=12849 Score = 291 bits (322), Expect = 8e-77 Identities = 180/191 (94%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 3777 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 3836 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 3837 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 3895 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 3896 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3955 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 3956 TTGGATTTATT 3966 >seq2061 Length=24901 Score = 107 bits (118), Expect = 2e-21 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||| |||||| ||||| ||||| | |||| | ||||| ||| || ||||||||||| Sbjct 20771 GAACCATGACTTTCACTTTAAAAAAGTGAGAGTGGCCAAAGGAGGTCTATGCTCGAATAC 20712 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATT 100 |||| ||||||||| ||||||||||||||| |||| || Sbjct 20711 ATTAGCATGGAATAGTAGAATAGGACGTGCAATTCTCTT 20673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511987084160