Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2590 322 9e-86 >seq2590 Length=12849 Score = 322 bits (356), Expect = 9e-86 Identities = 193/203 (95%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5149 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 5208 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 |||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5209 CATCTCCTTAACCGAAAGGTTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 5268 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 5269 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGT 5328 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||| |||||| Sbjct 5329 TGATTACGTCCCTGCCTTTTGTA 5351 Score = 165 bits (182), Expect = 2e-38 Identities = 100/106 (94%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 4703 GAACGAGACCTTAACCTGCTAAATAGCCCGGCTAGCTTTGGCTGGTCGCTGGCTTCTTAG 4762 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4763 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 4808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947175334912