Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 363 2e-98 seq3 77.0 5e-12 >seq12 Length=476517 Score = 363 bits (402), Expect = 2e-98 Identities = 236/258 (91%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 394985 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAG 395044 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 395045 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 395103 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || | |||| | ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 395104 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 395163 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 395164 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 395223 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 395224 AAGAGCTATCAATCTGTC 395241 >seq3 Length=8560927 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 || |||||| | ||||||| ||||||||| |||||||| || |||||||||||||||| Sbjct 2924128 ACGCCACCAGCGAAGAACGACCATGCACCGCCACCCATGCAACTAAGAAAGAGCTATCAA 2924069 Query 253 TCTGT 257 ||||| Sbjct 2924068 TCTGT 2924064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799351604